RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 KTI12Q96EK9 354 aaPredicted RBP9.07□□□□□ -0.96
USP11-211ENST00000489111 Q96MT0 163 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 GNRHR2Q96P88 292 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 SIGLEC12Q96PQ1 595 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 TNFRSF13CQ96RJ3 184 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 IL4I1Q96RQ9 567 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 ASPNQ9BXN1 380 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 POLDIP3Q9BY77 421 aaKnown RBP9.07□□□□□ -0.96
USP11-211ENST00000489111 MRPS26Q9BYN8 205 aaKnown RBP9.07□□□□□ -0.96
USP11-211ENST00000489111 OR11A1Q9GZK7 315 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.07□□□□□ -0.96
USP11-211ENST00000489111 UBQLN3Q9H347 655 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 PROK2Q9HC23 129 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 MCCC2Q9HCC0 563 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 ZFP64Q9NPA5 681 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 BAIAP2Q9UQB8 552 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 KLF13Q9Y2Y9 288 aaPredicted RBP9.07□□□□□ -0.96
USP11-211ENST00000489111 TPRKBQ9Y3C4 175 aa9.07□□□□□ -0.96
USP11-211ENST00000489111 PTPRZ1P23471 2315 aaPredicted RBP9.06□□□□□ -0.96
USP11-211ENST00000489111 CNOT1A5YKK6 2376 aaKnown RBP9.06□□□□□ -0.96
USP11-211ENST00000489111 ZC3H12DA2A288 527 aaKnown RBP9.06□□□□□ -0.96
USP11-211ENST00000489111 LRRC3CA6NJW4 275 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 LRRN3E7EW58 273 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 H3BML4 177 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 EFSO43281 561 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 TLX3O43711 291 aaPredicted RBP9.06□□□□□ -0.96
USP11-211ENST00000489111 OR2T1O43869 369 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 NPIPB7O75200 414 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 NEURL1O76050 574 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 IFNGP01579 166 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 BGLAPP02818 100 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 CCDC159P0C7I6 412 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 PEPDP12955 493 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 ZNF17P17021 662 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 CRHBPP24387 322 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 FKBP2P26885 142 aaKnown RBP9.06□□□□□ -0.96
USP11-211ENST00000489111 GDF1P27539 372 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 ADH6P28332 368 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 NOS3P29474 1203 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 SRD5A2P31213 254 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 IDUAP35475 653 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 MLLT10P55197 1068 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 GABARAPL2P60520 117 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 CXCR4P61073 352 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 RPS4XP62701 263 aaKnown RBP9.06□□□□□ -0.96
USP11-211ENST00000489111 MFSD13AQ14CX5 517 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 TMEM44Q2T9K0 475 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 SYT14P1Q58G82 188 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 ACSM5Q6NUN0 579 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 ARHGAP11AQ6P4F7 1023 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 ZNF227Q86WZ6 799 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 LRRC17Q8N6Y2 441 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 TCEANCQ8N8B7 351 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 OR2M7Q8NG81 312 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 OR4Q3Q8NH05 313 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 OR6S1Q8NH40 331 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 OR14L1PQ8NHC6 308 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 TMEM163Q8TC26 289 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 POC1BQ8TC44 478 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 LIPHQ8WWY8 451 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 UBE2FQ969M7 185 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 ZNF566Q969W8 418 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 SLC25A36Q96CQ1 311 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 NTNG2Q96CW9 530 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 MOGAT1Q96PD6 335 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 PIGQQ9BRB3 760 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 TAPBPLQ9BX59 468 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 TMEM185BQ9H7F4 350 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 KLHL1Q9NR64 748 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 DEPPQ9NTK1 212 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 TUBA8Q9NY65 449 aaPredicted RBP9.06□□□□□ -0.96
USP11-211ENST00000489111 ZNF226Q9NYT6 803 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 DNAJC27Q9NZQ0 273 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 AASSQ9UDR5 926 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 WASF3Q9UPY6 502 aa9.06□□□□□ -0.96
USP11-211ENST00000489111 RPH3AQ9Y2J0 694 aaPredicted RBP9.06□□□□□ -0.96
USP11-211ENST00000489111 A0A087WXM4 84 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 SH3D21A4FU49 640 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 SNTNA6NMZ2 147 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 BLOC1S5-TXNDC5H3BN57 136 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 M0R3G1 203 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 BHLHE40O14503 412 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 SURF4O15260 269 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 RRP8O43159 456 aaKnown RBP9.05□□□□□ -0.96
USP11-211ENST00000489111 TLX2O43763 284 aaPredicted RBP9.05□□□□□ -0.96
USP11-211ENST00000489111 XPNPEP2O43895 674 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 PRKYO43930 277 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 NME2P1O60361 137 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 PTP4A3O75365 173 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 WBP4O75554 376 aaKnown RBP9.05□□□□□ -0.96
USP11-211ENST00000489111 TRAPPC6AO75865 159 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 OR6A2O95222 327 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 WISP1O95388 367 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 PPP1R3DO95685 299 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 SP1P08047 785 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 ASAH2BP0C7U1 165 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 ATP6V1B1P15313 513 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 ZNF3P17036 446 aa9.05□□□□□ -0.96
USP11-211ENST00000489111 PAICSP22234 425 aaKnown RBP9.05□□□□□ -0.96
USP11-211ENST00000489111 NME2P22392 152 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms