RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 ZNF33BQ06732 778 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 CYLC2Q14093 348 aaPredicted RBP2.87□□□□□ -1.95
PRPF4-203ENST00000488937 DMC1Q14565 340 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 P2RY6Q15077 328 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 RAB35Q15286 201 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 TWIST1Q15672 202 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 RGS21Q2M5E4 152 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 UNC50Q53HI1 259 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 FAM120AOSQ5T036 256 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 UTF1Q5T230 341 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 PVRIGQ6DKI7 326 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 ADAMTSL5Q6ZMM2 481 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 TMPRSS11AQ6ZMR5 421 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 MBOAT1Q6ZNC8 495 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 Q6ZTC4 211 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 LINC00336Q6ZUF6 198 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 C9orf139Q6ZV77 190 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 ERICH1Q86X53 443 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 CDKL3Q8IVW4 592 aaPredicted RBP2.87□□□□□ -1.95
PRPF4-203ENST00000488937 NELFCDQ8IXH7 590 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 FBXL14Q8N1E6 418 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 ZNF843Q8N446 348 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 MARVELD2Q8N4S9 558 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 JAGN1Q8N5M9 183 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 MS4A15Q8N5U1 240 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 ARFGAP1Q8N6T3 406 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 TPRX1Q8N7U7 411 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 SNX31Q8N9S9 440 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 OR8J2Q8NGG1 315 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 OR4D6Q8NGJ1 314 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 OR1K1Q8NGR3 316 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 GATAD1Q8WUU5 269 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 ZNRF4Q8WWF5 429 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 GTF2H4Q92759 462 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.87□□□□□ -1.95
PRPF4-203ENST00000488937 FAM131CQ96AQ9 280 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 NSL1Q96IY1 281 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 FAM218AQ96MZ4 157 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 ZNF641Q96N77 438 aaPredicted RBP2.87□□□□□ -1.95
PRPF4-203ENST00000488937 ZNF385AQ96PM9 386 aaKnown RBP2.87□□□□□ -1.95
PRPF4-203ENST00000488937 CLCC1Q96S66 551 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 SLC35A5Q9BS91 424 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 UPF3BQ9BZI7 483 aaKnown RBP2.87□□□□□ -1.95
PRPF4-203ENST00000488937 NDEL1Q9GZM8 345 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 GBA3Q9H227 469 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 BICC1Q9H694 974 aaKnown RBP2.87□□□□□ -1.95
PRPF4-203ENST00000488937 KIR3DX1Q9H7L2 352 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 NHEJ1Q9H9Q4 299 aaPredicted RBP2.87□□□□□ -1.95
PRPF4-203ENST00000488937 EBF2Q9HAK2 575 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 UBE2TQ9NPD8 197 aaPredicted RBP2.87□□□□□ -1.95
PRPF4-203ENST00000488937 CUTCQ9NTM9 273 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 NKIRAS1Q9NYS0 192 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 KIF25Q9UIL4 384 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 PPP2R2CQ9Y2T4 447 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 PTGDR2Q9Y5Y4 395 aa2.87□□□□□ -1.95
PRPF4-203ENST00000488937 PLB1Q6P1J6 1458 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 IGLV5-37A0A075B6J1 123 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 IGHV4-61A0A0C4DH41 118 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 LY6G6EA0A0G2JKS1 128 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 RPS10-NUDT3A0A1W2PQS6 291 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 TMEM213A2RRL7 107 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 E7ENQ6 273 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 E7EWF7 191 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 TOR1AO14656 332 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 HSD17B6O14756 317 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 RGS16O15492 202 aaPredicted RBP2.86□□□□□ -1.95
PRPF4-203ENST00000488937 B4GALT5O43286 388 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 COCHO43405 550 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 EIF4E2O60573 245 aaKnown RBP2.86□□□□□ -1.95
PRPF4-203ENST00000488937 LYPD3O95274 346 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 FARS2O95363 451 aaKnown RBP2.86□□□□□ -1.95
PRPF4-203ENST00000488937 PAK4O96013 591 aaPredicted RBP2.86□□□□□ -1.95
PRPF4-203ENST00000488937 IGHV4-59P01825 116 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 IFNW1P05000 195 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 TACSTD2P09758 323 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 IGHV4-38-2P0DP08 117 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 SLC2A2P11168 524 aaPredicted RBP2.86□□□□□ -1.95
PRPF4-203ENST00000488937 CTRB1P17538 263 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 RPL35AP18077 110 aaKnown RBP2.86□□□□□ -1.95
PRPF4-203ENST00000488937 PMCHP20382 165 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 GABRR2P28476 465 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 CD40LGP29965 261 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 IFNA8P32881 189 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 TNFSF9P41273 254 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 SLC1A1P43005 524 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 YAP1P46937 504 aaKnown RBP2.86□□□□□ -1.95
PRPF4-203ENST00000488937 CX3CR1P49238 355 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 TMED10P49755 219 aaKnown RBP2.86□□□□□ -1.95
PRPF4-203ENST00000488937 PKNOX1P55347 436 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 STX17P56962 302 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 UBE2G2P60604 165 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 ABCE1P61221 599 aaKnown RBP2.86□□□□□ -1.95
PRPF4-203ENST00000488937 TSPAN5P62079 268 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 RPL8P62917 257 aaKnown RBP2.86□□□□□ -1.95
PRPF4-203ENST00000488937 DLG1Q12959 904 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 FADDQ13158 208 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 DPYSL3Q14195 570 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 EIF2B1Q14232 305 aaKnown RBP2.86□□□□□ -1.95
PRPF4-203ENST00000488937 MAPRE2Q15555 327 aa2.86□□□□□ -1.95
PRPF4-203ENST00000488937 ZBTB6Q15916 424 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms