RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 ZIC4Q8N9L1 334 aa13.92□□□□□ -0.18
ERGIC3-217ENST00000488935 VPS37AQ8NEZ2 397 aa13.92□□□□□ -0.18
ERGIC3-217ENST00000488935 WDR60Q8WVS4 1066 aa13.92□□□□□ -0.18
ERGIC3-217ENST00000488935 TESCQ96BS2 214 aa13.92□□□□□ -0.18
ERGIC3-217ENST00000488935 FBXO17Q96EF6 278 aa13.92□□□□□ -0.18
ERGIC3-217ENST00000488935 CCDC115Q96NT0 180 aa13.92□□□□□ -0.18
ERGIC3-217ENST00000488935 SLC17A5Q9NRA2 495 aa13.92□□□□□ -0.18
ERGIC3-217ENST00000488935 POLE3Q9NRF9 147 aa13.92□□□□□ -0.18
ERGIC3-217ENST00000488935 MALT1Q9UDY8 824 aa13.92□□□□□ -0.18
ERGIC3-217ENST00000488935 MOKQ9UQ07 419 aa13.92□□□□□ -0.18
ERGIC3-217ENST00000488935 AGAP5A6NIR3 686 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 TLX2O43763 284 aaPredicted RBP13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 AGR2O95994 175 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 KITP10721 976 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 PRG2P13727 222 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 IL7RP16871 459 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 SLC35A1P78382 337 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 BST1Q10588 318 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 EPS8Q12929 822 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 STX3Q13277 289 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 SLC17A1Q14916 467 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 GTDC1Q4AE62 458 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 OTUD3Q5T2D3 398 aaPredicted RBP13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 C6orf52Q5T4I8 152 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 IL17RELQ6ZVW7 336 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 GPAT4Q86UL3 456 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 HOMEZQ8IX15 550 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 CADM2Q8N3J6 435 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 ANKRD42Q8N9B4 389 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 DDIT4LQ96D03 193 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 AURKBQ96GD4 344 aaPredicted RBP13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 TRNT1Q96Q11 434 aaKnown RBP13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 OR52E6Q96RD3 313 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 PANX1Q96RD7 426 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 TNFRSF13CQ96RJ3 184 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 GRIP2Q9C0E4 1043 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 MEAF6Q9HAF1 191 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 EXOSC3Q9NQT5 275 aaKnown RBP13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 MGAT4BQ9UQ53 548 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 MXRA5Q9NR99 2828 aa13.91□□□□□ -0.18
ERGIC3-217ENST00000488935 CFAP73A6NFT4 308 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 NR5A2O00482 541 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 BIRC5O15392 142 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 ETFAP13804 333 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 ZNF16P17020 682 aaPredicted RBP13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 EPHA3P29320 983 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 CLNS1AP54105 237 aaKnown RBP13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 NRF1Q16656 503 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 CHRFAM7AQ494W8 412 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 ZNF836Q6ZNA1 936 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 LRRC74BQ6ZQY2 392 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 AAED1Q7RTV5 226 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 DEPDC4Q8N2C3 294 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 KDM8Q8N371 416 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 CLIP4Q8N3C7 705 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 MGARPQ8TDB4 240 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 FAM168AQ92567 244 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 C3orf49Q96BT1 292 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 KCNK17Q96T54 332 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 NAA11Q9BSU3 229 aaPredicted RBP13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 TMEM109Q9BVC6 243 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 SEC61A2Q9H9S3 476 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 AIG1Q9NVV5 245 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 ADPRHL2Q9NX46 363 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 BTNL2Q9UIR0 455 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 TRAPPC4Q9Y296 219 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 STAB1Q9NY15 2570 aa13.9□□□□□ -0.18
ERGIC3-217ENST00000488935 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.89□□□□□ -0.193e-7■□□□□ 10.8
ERGIC3-217ENST00000488935 LIPT2A6NK58 231 aa13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 FRS3O43559 492 aa13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 LGI1O95970 557 aa13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 RPS4Y1P22090 263 aaKnown RBP13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 SLC1A3P43003 542 aa13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 CLK1P49759 484 aaKnown RBP13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 SELENOPP49908 381 aa13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 HOXC5Q00444 222 aa13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 CARTPTQ16568 116 aa13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 MST1LQ2TV78 715 aa13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 AP1ARQ63HQ0 302 aa13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 OR7E24Q6IFN5 339 aa13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 VHLLQ6RSH7 139 aa13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 LINGO2Q7L985 606 aa13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 ANKS4BQ8N8V4 417 aa13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 OR9K2Q8NGE7 335 aa13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 ZIM3Q96PE6 472 aa13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 ADAM19Q9H013 955 aa13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 MTHFD2LQ9H903 347 aaPredicted RBP13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 SLC9A8Q9Y2E8 581 aa13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 GPR45Q9Y5Y3 372 aa13.89□□□□□ -0.19
ERGIC3-217ENST00000488935 A0A096LPE4 126 aa13.88□□□□□ -0.19
ERGIC3-217ENST00000488935 A0A1W2PPZ6 126 aa13.88□□□□□ -0.19
ERGIC3-217ENST00000488935 ZNF208O43345 1280 aa13.88□□□□□ -0.19
ERGIC3-217ENST00000488935 PGRP06401 933 aa13.88□□□□□ -0.19
ERGIC3-217ENST00000488935 GUSBP08236 651 aa13.88□□□□□ -0.19
ERGIC3-217ENST00000488935 IGHV4-31P0DP07 118 aa13.88□□□□□ -0.19
ERGIC3-217ENST00000488935 CXCR1P25024 350 aa13.88□□□□□ -0.19
ERGIC3-217ENST00000488935 ACAA2P42765 397 aaKnown RBP13.88□□□□□ -0.19
ERGIC3-217ENST00000488935 HTR3AP46098 478 aa13.88□□□□□ -0.19
ERGIC3-217ENST00000488935 GGTLC2Q14390 218 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms