RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 SSC4DQ8WTU2 575 aa14.3□□□□□ -0.12
HDAC7-224ENST00000488927 NAA11Q9BSU3 229 aaPredicted RBP14.3□□□□□ -0.12
HDAC7-224ENST00000488927 FNDC11Q9BVV2 318 aa14.3□□□□□ -0.12
HDAC7-224ENST00000488927 SRXN1Q9BYN0 137 aa14.3□□□□□ -0.12
HDAC7-224ENST00000488927 GP6Q9HCN6 339 aa14.3□□□□□ -0.12
HDAC7-224ENST00000488927 RIMS3Q9UJD0 308 aa14.3□□□□□ -0.12
HDAC7-224ENST00000488927 ENPP4Q9Y6X5 453 aa14.3□□□□□ -0.12
HDAC7-224ENST00000488927 TRAV36DV7A0A075B6V5 113 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 ZC3H12DA2A288 527 aaKnown RBP14.29□□□□□ -0.12
HDAC7-224ENST00000488927 AQP12BA6NM10 295 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 ACOT8O14734 319 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 TOXO94900 526 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 TMIGD3P0DMS9 266 aaPredicted RBP14.29□□□□□ -0.12
HDAC7-224ENST00000488927 RHCEP18577 417 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 RBM34P42696 430 aaKnown RBP14.29□□□□□ -0.12
HDAC7-224ENST00000488927 AGFG1P52594 562 aaKnown RBP14.29□□□□□ -0.12
HDAC7-224ENST00000488927 OR2B6P58173 313 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 EGR4Q05215 589 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 GABPB1Q06547 395 aaPredicted RBP14.29□□□□□ -0.12
HDAC7-224ENST00000488927 FLOT2Q14254 428 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 FAM69AQ5T7M9 428 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 FCRLAQ7L513 359 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 MRGPRGQ86SM5 289 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 MCEMP1Q8IX19 187 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 AQP12AQ8IXF9 295 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 OFCC1Q8IZS5 231 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 MFSD8Q8NHS3 518 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 RNF128Q8TEB7 428 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 GMPPAQ96IJ6 420 aaPredicted RBP14.29□□□□□ -0.12
HDAC7-224ENST00000488927 HS6ST2Q96MM7 605 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 TACO1Q9BSH4 297 aaKnown RBP14.29□□□□□ -0.12
HDAC7-224ENST00000488927 SFXN3Q9BWM7 321 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 ANKRD19PQ9H560 264 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 MAGIXQ9H6Y5 334 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 ZNF629Q9UEG4 869 aaPredicted RBP14.29□□□□□ -0.12
HDAC7-224ENST00000488927 A4GNTQ9UNA3 340 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 POMPQ9Y244 141 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 V9GYQ6 96 aa14.29□□□□□ -0.12
HDAC7-224ENST00000488927 HELZ2Q9BYK8 2649 aaKnown RBP14.29□□□□□ -0.12
HDAC7-224ENST00000488927 IGKV1D-42A0A075B6H8 117 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 A0A0G2JNJ9 132 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 TCRBV5S2A0A599 114 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 HTR3EA5X5Y0 456 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 LIPT2A6NK58 231 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 KDM4EB2RXH2 506 aaPredicted RBP14.28□□□□□ -0.12
HDAC7-224ENST00000488927 DVL2O14641 736 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 ZG16O60844 167 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 IL18BPO95998 194 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 PLGP00747 810 aaPredicted RBP14.28□□□□□ -0.12
HDAC7-224ENST00000488927 THY1P04216 161 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 SEMG1P04279 462 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 FABP3P05413 133 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 IMPDH2P12268 514 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 CTSSP25774 331 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 GTF2E2P29084 291 aaKnown RBP14.28□□□□□ -0.12
HDAC7-224ENST00000488927 OPRM1P35372 400 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 TRAM2Q15035 370 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 FAM98BQ52LJ0 330 aaKnown RBP14.28□□□□□ -0.12
HDAC7-224ENST00000488927 HIVEP3Q5T1R4 2406 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 PAQR6Q6TCH4 344 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 ASRGL1Q7L266 308 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 YTHDF3Q7Z739 585 aaKnown RBP14.28□□□□□ -0.12
HDAC7-224ENST00000488927 TSPYL5Q86VY4 417 aaPredicted RBP14.28□□□□□ -0.12
HDAC7-224ENST00000488927 FAM86B1Q8N7N1 296 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 PIGXQ8TBF5 258 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 SDCCAG3Q96C92 435 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 C7orf34Q96L11 122 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 ZNF300Q96RE9 604 aaPredicted RBP14.28□□□□□ -0.12
HDAC7-224ENST00000488927 ZNF347Q96SE7 839 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 ZNF426Q9BUY5 554 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 KLHL4Q9C0H6 718 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 IL1RAPQ9NPH3 570 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 NDUFAF4Q9P032 175 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 KLHL9Q9P2J3 617 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 Q9UFV3 132 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 SLC7A8Q9UHI5 535 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 RNF6Q9Y252 685 aa14.28□□□□□ -0.12
HDAC7-224ENST00000488927 AQP8O94778 261 aa14.27□□□□□ -0.13
HDAC7-224ENST00000488927 LYPD3O95274 346 aa14.27□□□□□ -0.13
HDAC7-224ENST00000488927 MT-ATP6P00846 226 aa14.27□□□□□ -0.13
HDAC7-224ENST00000488927 IGF2P01344 180 aa14.27□□□□□ -0.13
HDAC7-224ENST00000488927 UMPSP11172 480 aa14.27□□□□□ -0.13
HDAC7-224ENST00000488927 FPR1P21462 350 aa14.27□□□□□ -0.13
HDAC7-224ENST00000488927 RPS5P46782 204 aaKnown RBP14.27□□□□□ -0.13
HDAC7-224ENST00000488927 YAP1P46937 504 aaKnown RBP14.27□□□□□ -0.13
HDAC7-224ENST00000488927 SMIM11AP58511 58 aa14.27□□□□□ -0.13
HDAC7-224ENST00000488927 VLDLRP98155 873 aa14.27□□□□□ -0.13
HDAC7-224ENST00000488927 CHRNB3Q05901 458 aa14.27□□□□□ -0.13
HDAC7-224ENST00000488927 SRSF1Q07955 248 aaKnown RBP eCLIP14.27□□□□□ -0.131e-7■□□□□ 10.9
HDAC7-224ENST00000488927 PDK3Q15120 406 aa14.27□□□□□ -0.13
HDAC7-224ENST00000488927 OR7A5Q15622 319 aa14.27□□□□□ -0.13
HDAC7-224ENST00000488927 NCCRP1Q6ZVX7 275 aaPredicted RBP14.27□□□□□ -0.13
HDAC7-224ENST00000488927 PIWIL3Q7Z3Z3 882 aaKnown RBP14.27□□□□□ -0.13
HDAC7-224ENST00000488927 CA5BP1Q8WTZ4 195 aa14.27□□□□□ -0.13
HDAC7-224ENST00000488927 ITLN2Q8WWU7 325 aaPredicted RBP14.27□□□□□ -0.13
HDAC7-224ENST00000488927 ROBO4Q8WZ75 1007 aa14.27□□□□□ -0.13
HDAC7-224ENST00000488927 INTS12Q96CB8 462 aaKnown RBP14.27□□□□□ -0.13
HDAC7-224ENST00000488927 KTI12Q96EK9 354 aaPredicted RBP14.27□□□□□ -0.13
HDAC7-224ENST00000488927 PRSS27Q9BQR3 290 aa14.27□□□□□ -0.13
HDAC7-224ENST00000488927 PTDSS2Q9BVG9 487 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms