RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 GPR157Q5UAW9 335 aa2.47□□□□□ -2.01
PTPN4-212ENST00000488896 PRSS41Q7RTY9 318 aa2.47□□□□□ -2.01
PTPN4-212ENST00000488896 UBALD1Q8TB05 177 aa2.47□□□□□ -2.01
PTPN4-212ENST00000488896 SPIN2AQ99865 258 aa2.47□□□□□ -2.01
PTPN4-212ENST00000488896 SPIN2BQ9BPZ2 258 aa2.47□□□□□ -2.01
PTPN4-212ENST00000488896 SPXQ9BT56 116 aa2.47□□□□□ -2.01
PTPN4-212ENST00000488896 POLR1EQ9GZS1 481 aaKnown RBP2.47□□□□□ -2.01
PTPN4-212ENST00000488896 C20orf85Q9H1P6 137 aa2.47□□□□□ -2.01
PTPN4-212ENST00000488896 SIAEQ9HAT2 523 aa2.47□□□□□ -2.01
PTPN4-212ENST00000488896 FOLH1BQ9HBA9 442 aa2.47□□□□□ -2.01
PTPN4-212ENST00000488896 NGBQ9NPG2 151 aa2.47□□□□□ -2.01
PTPN4-212ENST00000488896 INPP5EQ9NRR6 644 aa2.47□□□□□ -2.01
PTPN4-212ENST00000488896 SH3TC1Q8TE82 1336 aa2.46□□□□□ -2.02
PTPN4-212ENST00000488896 IGLV2-18A0A075B6J9 118 aa2.46□□□□□ -2.02
PTPN4-212ENST00000488896 DCTN6O00399 190 aa2.46□□□□□ -2.02
PTPN4-212ENST00000488896 RASGRF2O14827 1237 aa2.46□□□□□ -2.02
PTPN4-212ENST00000488896 SUPT3HO75486 399 aa2.46□□□□□ -2.02
PTPN4-212ENST00000488896 PPIAL4GP0DN37 164 aa2.46□□□□□ -2.02
PTPN4-212ENST00000488896 PGCP20142 388 aa2.46□□□□□ -2.02
PTPN4-212ENST00000488896 TPSB2P20231 275 aa2.46□□□□□ -2.02
PTPN4-212ENST00000488896 PSMA2P25787 234 aa2.46□□□□□ -2.02
PTPN4-212ENST00000488896 SLC26A3P40879 764 aa2.46□□□□□ -2.02
PTPN4-212ENST00000488896 RABIFP47224 123 aa2.46□□□□□ -2.02
PTPN4-212ENST00000488896 DAP3P51398 398 aaKnown RBP2.46□□□□□ -2.02
PTPN4-212ENST00000488896 TPSAB1Q15661 275 aa2.46□□□□□ -2.02
PTPN4-212ENST00000488896 RSPO1Q2MKA7 263 aaPredicted RBP2.46□□□□□ -2.02
PTPN4-212ENST00000488896 LRRC10Q5BKY1 277 aa2.46□□□□□ -2.02
PTPN4-212ENST00000488896 ZNF620Q6ZNG0 422 aa2.46□□□□□ -2.02
PTPN4-212ENST00000488896 RBM43Q6ZSC3 357 aaKnown RBP2.46□□□□□ -2.02
PTPN4-212ENST00000488896 CATSPER4Q7RTX7 472 aa2.46□□□□□ -2.02
PTPN4-212ENST00000488896 MRPS31Q92665 395 aaKnown RBP2.46□□□□□ -2.02
PTPN4-212ENST00000488896 ZNF641Q96N77 438 aaPredicted RBP2.46□□□□□ -2.02
PTPN4-212ENST00000488896 CCNL2Q96S94 520 aaPredicted RBP2.46□□□□□ -2.02
PTPN4-212ENST00000488896 SLC35A5Q9BS91 424 aa2.46□□□□□ -2.02
PTPN4-212ENST00000488896 SUDS3Q9H7L9 328 aaPredicted RBP2.46□□□□□ -2.02
PTPN4-212ENST00000488896 OPN4Q9UHM6 478 aa2.46□□□□□ -2.02
PTPN4-212ENST00000488896 STAP1Q9ULZ2 295 aa2.46□□□□□ -2.02
PTPN4-212ENST00000488896 YTHDF2Q9Y5A9 579 aaKnown RBP2.46□□□□□ -2.02
PTPN4-212ENST00000488896 COLCA2A8K830 154 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 CLDN5O00501 218 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 RBBP9O75884 186 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 STAMBPO95630 424 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 TBXA2RP21731 343 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 YWHABP31946 246 aaKnown RBP2.45□□□□□ -2.02
PTPN4-212ENST00000488896 BTCP35070 178 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 HPCAL1P37235 193 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 GLP1RP43220 463 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 KIR2DS4P43632 304 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 ARRB1P49407 418 aaPredicted RBP2.45□□□□□ -2.02
PTPN4-212ENST00000488896 RIPK1Q13546 671 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 ATP6AP1Q15904 470 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 TMEM183BQ1AE95 376 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 RFX4Q33E94 735 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 BCL7AQ4VC05 210 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 LRRC8BQ6P9F7 803 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 SYT10Q6XYQ8 523 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 Q6ZN92 141 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 PCP2Q8IVA1 136 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 TMEM183AQ8IXX5 376 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 Q8N976 141 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 LINC00477Q96M19 166 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 TMEM237Q96Q45 408 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 FICDQ9BVA6 458 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 ZNF226Q9NYT6 803 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 CHMP2BQ9UQN3 213 aa2.45□□□□□ -2.02
PTPN4-212ENST00000488896 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 IGLV11-55A0A075B6I3 123 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 RS1O15537 224 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 LANCL1O43813 399 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 TRIM16O95361 564 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 C6orf47O95873 294 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 MT-ND3P03897 115 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 TDGF1P13385 188 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 ABOP16442 354 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 TDGF1P3P51864 188 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 REG3AQ06141 175 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 MXD4Q14582 209 aaPredicted RBP2.44□□□□□ -2.02
PTPN4-212ENST00000488896 Q5W150 140 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 ISLR2Q6UXK2 745 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 HMGN2P46Q86SG4 172 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 ACOT1Q86TX2 421 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 SLC26A11Q86WA9 606 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 OR4K14Q8NGD5 310 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 ASB9Q96DX5 294 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 FAM111AQ96PZ2 611 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 ZNF430Q9H8G1 570 aaPredicted RBP2.44□□□□□ -2.02
PTPN4-212ENST00000488896 NUDT15Q9NV35 164 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 NINJ2Q9NZG7 142 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 GNG12Q9UBI6 72 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 GSTK1Q9Y2Q3 226 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 KNSTRNQ9Y448 316 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 SLC25A15Q9Y619 301 aa2.44□□□□□ -2.02
PTPN4-212ENST00000488896 RNF103-CHMP3A0A140T963 221 aa2.43□□□□□ -2.02
PTPN4-212ENST00000488896 B4GALT5O43286 388 aa2.43□□□□□ -2.02
PTPN4-212ENST00000488896 CD5LO43866 347 aa2.43□□□□□ -2.02
PTPN4-212ENST00000488896 ENTPD5O75356 428 aa2.43□□□□□ -2.02
PTPN4-212ENST00000488896 LRATO95237 230 aa2.43□□□□□ -2.02
PTPN4-212ENST00000488896 DNAJB1P25685 340 aa2.43□□□□□ -2.02
PTPN4-212ENST00000488896 PTGDSP41222 190 aa2.43□□□□□ -2.02
PTPN4-212ENST00000488896 ASMTP46597 345 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms