RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 NR2F1P10589 423 aa13.44□□□□□ -0.26
TRIM50-203ENST00000488217 BMP4P12644 408 aa13.44□□□□□ -0.26
TRIM50-203ENST00000488217 UQCRBP14927 111 aa13.44□□□□□ -0.26
TRIM50-203ENST00000488217 NUDT6P53370 316 aa13.44□□□□□ -0.26
TRIM50-203ENST00000488217 TGFBR3Q03167 851 aa13.44□□□□□ -0.26
TRIM50-203ENST00000488217 LRRC74AQ0VAA2 488 aa13.44□□□□□ -0.26
TRIM50-203ENST00000488217 SLC17A1Q14916 467 aa13.44□□□□□ -0.26
TRIM50-203ENST00000488217 C1QTNF12Q5T7M4 302 aa13.44□□□□□ -0.26
TRIM50-203ENST00000488217 TSPO2Q5TGU0 170 aa13.44□□□□□ -0.26
TRIM50-203ENST00000488217 C11orf71Q6IPW1 123 aa13.44□□□□□ -0.26
TRIM50-203ENST00000488217 ZNF544Q6NX49 715 aa13.44□□□□□ -0.26
TRIM50-203ENST00000488217 PODNL1Q6PEZ8 512 aa13.44□□□□□ -0.26
TRIM50-203ENST00000488217 SLC7A10Q9NS82 523 aa13.44□□□□□ -0.26
TRIM50-203ENST00000488217 DCTN4Q9UJW0 460 aa13.44□□□□□ -0.26
TRIM50-203ENST00000488217 NUP214P35658 2090 aaPredicted RBP13.44□□□□□ -0.26
TRIM50-203ENST00000488217 ZC3H12DA2A288 527 aaKnown RBP13.43□□□□□ -0.26
TRIM50-203ENST00000488217 ERLIN1O75477 346 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 KRT75O95678 551 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 ALDOCP09972 364 aaKnown RBP13.43□□□□□ -0.26
TRIM50-203ENST00000488217 CXCR1P25024 350 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 IL12AP29459 219 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 APOBEC3AP31941 199 aaPredicted RBP13.43□□□□□ -0.26
TRIM50-203ENST00000488217 CDKN2CP42773 168 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 PRPS1P60891 318 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 SPOCK1Q08629 439 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 BST1Q10588 318 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 EPS8Q12929 822 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 CEACAM7Q14002 265 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 TNFAIP8L3Q5GJ75 292 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 COX20Q5RI15 118 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 C9orf135Q5VTT2 229 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 PAQR6Q6TCH4 344 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 CLEC2AQ6UVW9 174 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 CASP12Q6UXS9 341 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 C17orf78Q8N4C9 275 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 ZIC4Q8N9L1 334 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 C1orf162Q8NEQ5 155 aaPredicted RBP13.43□□□□□ -0.26
TRIM50-203ENST00000488217 WDR60Q8WVS4 1066 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 TNFRSF13CQ96RJ3 184 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 PAIP2Q9BPZ3 127 aaKnown RBP13.43□□□□□ -0.26
TRIM50-203ENST00000488217 SF3B5Q9BWJ5 86 aaKnown RBP13.43□□□□□ -0.26
TRIM50-203ENST00000488217 AMBRA1Q9C0C7 1298 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 CENPHQ9H3R5 247 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 FKRPQ9H9S5 495 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 SLC17A5Q9NRA2 495 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 AIG1Q9NVV5 245 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 RLIMQ9NVW2 624 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 AMDHD2Q9Y303 409 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 GPR45Q9Y5Y3 372 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 ATP23Q9Y6H3 246 aa13.43□□□□□ -0.26
TRIM50-203ENST00000488217 FREM1Q5H8C1 2179 aa13.42□□□□□ -0.26
TRIM50-203ENST00000488217 ELOA3DA6NLF2 546 aaPredicted RBP13.42□□□□□ -0.26
TRIM50-203ENST00000488217 SDHDO14521 159 aa13.42□□□□□ -0.26
TRIM50-203ENST00000488217 GPIP06744 558 aa13.42□□□□□ -0.26
TRIM50-203ENST00000488217 RPS4Y1P22090 263 aaKnown RBP13.42□□□□□ -0.26
TRIM50-203ENST00000488217 MPGP29372 298 aa13.42□□□□□ -0.26
TRIM50-203ENST00000488217 CHRNB3Q05901 458 aa13.42□□□□□ -0.26
TRIM50-203ENST00000488217 LOXL1Q08397 574 aaPredicted RBP13.42□□□□□ -0.26
TRIM50-203ENST00000488217 ELOA3BQ3SY89 546 aa13.42□□□□□ -0.26
TRIM50-203ENST00000488217 CHRFAM7AQ494W8 412 aa13.42□□□□□ -0.26
TRIM50-203ENST00000488217 MRPL2Q5T653 305 aaKnown RBP13.42□□□□□ -0.26
TRIM50-203ENST00000488217 TMEM225Q6GV28 225 aa13.42□□□□□ -0.26
TRIM50-203ENST00000488217 B3GLCTQ6Y288 498 aa13.42□□□□□ -0.26
TRIM50-203ENST00000488217 AAED1Q7RTV5 226 aa13.42□□□□□ -0.26
TRIM50-203ENST00000488217 PEX5LQ8IYB4 626 aa13.42□□□□□ -0.26
TRIM50-203ENST00000488217 ZNF440Q8IYI8 595 aa13.42□□□□□ -0.26
TRIM50-203ENST00000488217 TMEM99Q8N816 258 aa13.42□□□□□ -0.26
TRIM50-203ENST00000488217 ELOA3Q8NG57 546 aa13.42□□□□□ -0.26
TRIM50-203ENST00000488217 HTRA1Q92743 480 aa13.42□□□□□ -0.26
TRIM50-203ENST00000488217 TMEM45BQ96B21 275 aa13.42□□□□□ -0.26
TRIM50-203ENST00000488217 ZBTB18Q99592 522 aa13.42□□□□□ -0.26
TRIM50-203ENST00000488217 PIF1Q9H611 641 aa13.42□□□□□ -0.26
TRIM50-203ENST00000488217 WDR55Q9H6Y2 383 aaPredicted RBP13.42□□□□□ -0.26
TRIM50-203ENST00000488217 PMF1-BGLAPU3KQ54 211 aa13.42□□□□□ -0.26
TRIM50-203ENST00000488217 CDHR4A6H8M9 788 aa13.41□□□□□ -0.26
TRIM50-203ENST00000488217 LIPT2A6NK58 231 aa13.41□□□□□ -0.26
TRIM50-203ENST00000488217 H7C417 338 aa13.41□□□□□ -0.26
TRIM50-203ENST00000488217 RFXANKO14593 260 aa13.41□□□□□ -0.26
TRIM50-203ENST00000488217 AKR7A3O95154 331 aa13.41□□□□□ -0.26
TRIM50-203ENST00000488217 F12P00748 615 aaPredicted RBP13.41□□□□□ -0.26
TRIM50-203ENST00000488217 TFPTP0C1Z6 253 aa13.41□□□□□ -0.26
TRIM50-203ENST00000488217 GKN3PP0CG01 181 aa13.41□□□□□ -0.26
TRIM50-203ENST00000488217 ACAA2P42765 397 aaKnown RBP13.41□□□□□ -0.26
TRIM50-203ENST00000488217 EFNA4P52798 201 aa13.41□□□□□ -0.26
TRIM50-203ENST00000488217 MAPK11Q15759 364 aa13.41□□□□□ -0.26
TRIM50-203ENST00000488217 TMEM249Q2WGJ8 235 aa13.41□□□□□ -0.26
TRIM50-203ENST00000488217 BEND6Q5SZJ8 279 aaPredicted RBP13.41□□□□□ -0.26
TRIM50-203ENST00000488217 CEP85LQ5SZL2 805 aa13.41□□□□□ -0.26
TRIM50-203ENST00000488217 OTUD3Q5T2D3 398 aaPredicted RBP13.41□□□□□ -0.26
TRIM50-203ENST00000488217 HHATQ5VTY9 493 aa13.41□□□□□ -0.26
TRIM50-203ENST00000488217 POMGNT2Q8NAT1 580 aa13.41□□□□□ -0.26
TRIM50-203ENST00000488217 GLB1L3Q8NCI6 653 aaPredicted RBP13.41□□□□□ -0.26
TRIM50-203ENST00000488217 OR9K2Q8NGE7 335 aa13.41□□□□□ -0.26
TRIM50-203ENST00000488217 OR52P1PQ8NH57 321 aa13.41□□□□□ -0.26
TRIM50-203ENST00000488217 PNPT1Q8TCS8 783 aaKnown RBP13.41□□□□□ -0.26
TRIM50-203ENST00000488217 AURKBQ96GD4 344 aaPredicted RBP13.41□□□□□ -0.26
TRIM50-203ENST00000488217 BOD1Q96IK1 185 aa13.41□□□□□ -0.26
TRIM50-203ENST00000488217 THAP1Q9NVV9 213 aa13.41□□□□□ -0.26
TRIM50-203ENST00000488217 ZNF232Q9UNY5 417 aa13.41□□□□□ -0.26
TRIM50-203ENST00000488217 CADP27708 2225 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms