RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 WDR60Q8WVS4 1066 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 DDIT4LQ96D03 193 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 NAA11Q9BSU3 229 aaPredicted RBP10.71□□□□□ -0.69
VPS16-208ENST00000487461 CACNG6Q9BXT2 260 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 SLC7A10Q9NS82 523 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 SLC6A13Q9NSD5 602 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 CBLN4Q9NTU7 201 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 RLIMQ9NVW2 624 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 PARPBPQ9NWS1 579 aa10.71□□□□□ -0.69
VPS16-208ENST00000487461 ANK3Q12955 4377 aaKnown RBP10.71□□□□□ -0.7
VPS16-208ENST00000487461 CR1P17927 2039 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 COL6A5A8TX70 2615 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 ATRQ13535 2644 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 IGHV4-30-2A0A087WSY4 118 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 A0A096LNT2 108 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 CD5LO43866 347 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 GPRIN2O60269 458 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 TP53P04637 393 aaPredicted RBP10.7□□□□□ -0.7
VPS16-208ENST00000487461 DBIP07108 87 aaKnown RBP10.7□□□□□ -0.7
VPS16-208ENST00000487461 GKN3PP0CG01 181 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 ACAA2P42765 397 aaKnown RBP10.7□□□□□ -0.7
VPS16-208ENST00000487461 ANXA11P50995 505 aaKnown RBP10.7□□□□□ -0.7
VPS16-208ENST00000487461 FABP6P51161 128 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 MVDP53602 400 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 TXNL4AP83876 142 aaKnown RBP10.7□□□□□ -0.7
VPS16-208ENST00000487461 SLC25A3Q00325 362 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 CEACAM7Q14002 265 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 GNA13Q14344 377 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 NRF1Q16656 503 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 TSPO2Q5TGU0 170 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 HHATQ5VTY9 493 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 PAQR6Q6TCH4 344 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 CASP12Q6UXS9 341 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 VRK2Q86Y07 508 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 TMEM99Q8N816 258 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 ANKRD42Q8N9B4 389 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 OR10H5Q8NGA6 315 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 HTRA1Q92743 480 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 ADAD1Q96M93 576 aaKnown RBP10.7□□□□□ -0.7
VPS16-208ENST00000487461 RHNO1Q9BSD3 238 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 AMBRA1Q9C0C7 1298 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 SLC17A5Q9NRA2 495 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 YAE1D1Q9NRH1 226 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 UPB1Q9UBR1 384 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 DCTN4Q9UJW0 460 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 POU2F3Q9UKI9 436 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 SLC9A8Q9Y2E8 581 aa10.7□□□□□ -0.7
VPS16-208ENST00000487461 FBN1P35555 2871 aaKnown RBP10.69□□□□□ -0.7
VPS16-208ENST00000487461 CHD3Q12873 2000 aaKnown RBP10.69□□□□□ -0.7
VPS16-208ENST00000487461 FAM234BA2RU67 622 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 LIPT2A6NK58 231 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 RFXANKO14593 260 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 HDAC3O15379 428 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 TLX2O43763 284 aaPredicted RBP10.69□□□□□ -0.7
VPS16-208ENST00000487461 SNNO75324 88 aaPredicted RBP10.69□□□□□ -0.7
VPS16-208ENST00000487461 AKR7A3O95154 331 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 KRT75O95678 551 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 TFPTP0C1Z6 253 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 KITP10721 976 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 MAP2K6P52564 334 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 LRRC74AQ0VAA2 488 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 BNIP2Q12982 314 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 GSTA3Q16772 222 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 OTUD3Q5T2D3 398 aaPredicted RBP10.69□□□□□ -0.7
VPS16-208ENST00000487461 CXXC5Q7LFL8 322 aaKnown RBP10.69□□□□□ -0.7
VPS16-208ENST00000487461 PEX5LQ8IYB4 626 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 FBXL14Q8N1E6 418 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 DEPDC4Q8N2C3 294 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 MUC15Q8N387 334 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 OR9K2Q8NGE7 335 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 OR52P1PQ8NH57 321 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 TMEM45BQ96B21 275 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 ZNF385AQ96PM9 386 aaKnown RBP10.69□□□□□ -0.7
VPS16-208ENST00000487461 ZBTB18Q99592 522 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 THAP1Q9NVV9 213 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 RAB21Q9UL25 225 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 CHST2Q9Y4C5 530 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 ATP23Q9Y6H3 246 aa10.69□□□□□ -0.7
VPS16-208ENST00000487461 CDHR4A6H8M9 788 aa10.68□□□□□ -0.7
VPS16-208ENST00000487461 TRPC5OSA6NMA1 111 aa10.68□□□□□ -0.7
VPS16-208ENST00000487461 SLC22A3O75751 556 aa10.68□□□□□ -0.7
VPS16-208ENST00000487461 IL6P05231 212 aa10.68□□□□□ -0.7
VPS16-208ENST00000487461 ETFAP13804 333 aa10.68□□□□□ -0.7
VPS16-208ENST00000487461 CXCR1P25024 350 aa10.68□□□□□ -0.7
VPS16-208ENST00000487461 MPGP29372 298 aa10.68□□□□□ -0.7
VPS16-208ENST00000487461 NUDT6P53370 316 aa10.68□□□□□ -0.7
VPS16-208ENST00000487461 RAB35Q15286 201 aa10.68□□□□□ -0.7
VPS16-208ENST00000487461 OR7A5Q15622 319 aa10.68□□□□□ -0.7
VPS16-208ENST00000487461 PDCD4Q53EL6 469 aaKnown RBP10.68□□□□□ -0.7
VPS16-208ENST00000487461 NXNQ6DKJ4 435 aa10.68□□□□□ -0.7
VPS16-208ENST00000487461 ZNF544Q6NX49 715 aa10.68□□□□□ -0.7
VPS16-208ENST00000487461 ZNF836Q6ZNA1 936 aa10.68□□□□□ -0.7
VPS16-208ENST00000487461 HIPK1Q86Z02 1210 aa10.68□□□□□ -0.7
VPS16-208ENST00000487461 ZNF440Q8IYI8 595 aa10.68□□□□□ -0.7
VPS16-208ENST00000487461 CLIP4Q8N3C7 705 aa10.68□□□□□ -0.7
VPS16-208ENST00000487461 CADM2Q8N3J6 435 aa10.68□□□□□ -0.7
VPS16-208ENST00000487461 C17orf78Q8N4C9 275 aa10.68□□□□□ -0.7
VPS16-208ENST00000487461 GLB1L3Q8NCI6 653 aaPredicted RBP10.68□□□□□ -0.7
VPS16-208ENST00000487461 C1orf162Q8NEQ5 155 aaPredicted RBP10.68□□□□□ -0.7
VPS16-208ENST00000487461 SLC38A5Q8WUX1 472 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms