RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 IGHDP01880 384 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 NCK1P16333 377 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 GABRR1P24046 479 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 CCR1P32246 355 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 RFC4P35249 363 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 DUSP3P51452 185 aaPredicted RBP2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 CRYBB1P53674 252 aaPredicted RBP2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 PKNOX1P55347 436 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 TNFRSF17Q02223 184 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 ZNF79Q15937 498 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 KLHL38Q2WGJ6 581 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 DMRTC1Q5HYR2 192 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 C11orf71Q6IPW1 123 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 FTMTQ8N4E7 242 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 CCDC71LQ8N9Z2 235 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 OR2L5Q8NG80 312 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 SETD7Q8WTS6 366 aaKnown RBP2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 C7orf33Q8WU49 177 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 SCFD1Q8WVM8 642 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 DNAJA4Q8WW22 397 aaPredicted RBP2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 SHC3Q92529 594 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 PHYHIPLQ96FC7 376 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 MTMR9Q96QG7 549 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 CLCC1Q96S66 551 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 PLEKHF1Q96S99 279 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 RNF2Q99496 336 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 ARHGDIGQ99819 225 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 SELENOIQ9C0D9 397 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 OR51J1Q9H342 316 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 RBKSQ9H477 322 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 SUDS3Q9H7L9 328 aaPredicted RBP2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 YY1AP1Q9H869 796 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 FN3KRPQ9HA64 309 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 FOLH1BQ9HBA9 442 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 MCCC2Q9HCC0 563 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 POLE4Q9NR33 117 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 PLSCR3Q9NRY6 295 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 TREM2Q9NZC2 230 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 PIGLQ9Y2B2 252 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 RPL36Q9Y3U8 105 aaKnown RBP2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 UGT2A1Q9Y4X1 527 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 IGHV3OR16-13A0A075B7E8 117 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 IGHV1OR21-1A0A087WYE8 117 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 IQANK1A0A1B0GTG1 560 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 SNTNA6NMZ2 147 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 A8MXQ7 604 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 TIMM8AO60220 97 aaPredicted RBP2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 FCMRO60667 390 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 B4GALT2O60909 372 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 ZNF780AO75290 641 aaPredicted RBP2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 BBOX1O75936 387 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 CLDN9O95484 217 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 STAMBPO95630 424 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 TSPAN12O95859 305 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 ZNF19P17023 458 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 NPR2P20594 1047 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 SHMT2P34897 504 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 RDXP35241 583 aaKnown RBP2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 UGT1A5P35504 534 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 SSR1P43307 286 aaKnown RBP2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 HLCSP50747 726 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 ATP1B3P54709 279 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 CSNK1G2P78368 415 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 IRX3P78415 501 aaPredicted RBP2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 ORC2Q13416 577 aaPredicted RBP2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 VGLL4Q14135 290 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 ZMYND11Q15326 602 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 CCDC14Q49A88 953 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 SAMD4BQ5PRF9 694 aaKnown RBP2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 OR2G6Q5TZ20 316 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 C1orf146Q5VVC0 180 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 OR52E8Q6IFG1 317 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 PGAP1Q75T13 922 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 TGIF2LYQ8IUE0 185 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 ERI1Q8IV48 349 aaKnown RBP2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 FAM83FQ8NEG4 500 aaPredicted RBP2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 OR4K14Q8NGD5 310 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 OR8J1Q8NGP2 316 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 MAGEE2Q8TD90 523 aaPredicted RBP2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 FRAT1Q92837 279 aaPredicted RBP2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 C10orf35Q96D05 121 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 PAGE5Q96GU1 130 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 TIMD4Q96H15 378 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 NPY6RQ99463 290 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 HIST1H4GQ99525 98 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 GON7Q9BXV9 100 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 POLR2J2Q9GZM3 115 aaKnown RBP2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 POLR2J3Q9H1A7 115 aaKnown RBP2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 SGK2Q9HBY8 427 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 BFARQ9NZS9 450 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 KIF25Q9UIL4 384 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 STAP1Q9ULZ2 295 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 TMCO1Q9UM00 188 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 ZNF256Q9Y2P7 627 aaPredicted RBP2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 ASB3Q9Y575 518 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 V9GY05 133 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 KANK1Q14678 1352 aa2.47□□□□□ -2.01
SNRNP27-204ENST00000487029 EEA1Q15075 1411 aa2.46□□□□□ -2.02
SNRNP27-204ENST00000487029 IGKV1D-8A0A087WSZ0 117 aa2.46□□□□□ -2.02
SNRNP27-204ENST00000487029 A0A0J9YXY3 114 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms