RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 OR9I1Q8NGQ6 314 aa21.59■■□□□ 1.05
LIME1-206ENST00000487026 VPS33AQ96AX1 596 aa21.59■■□□□ 1.05
LIME1-206ENST00000487026 ALG2Q9H553 416 aa21.59■■□□□ 1.05
LIME1-206ENST00000487026 TPT1P8Q9HAU6 139 aa21.59■■□□□ 1.05
LIME1-206ENST00000487026 NKIRAS1Q9NYS0 192 aa21.59■■□□□ 1.05
LIME1-206ENST00000487026 TAS2R16Q9NYV7 291 aa21.59■■□□□ 1.05
LIME1-206ENST00000487026 P2RX2Q9UBL9 471 aa21.59■■□□□ 1.05
LIME1-206ENST00000487026 MALT1Q9UDY8 824 aa21.59■■□□□ 1.05
LIME1-206ENST00000487026 CDHR4A6H8M9 788 aa21.58■■□□□ 1.05
LIME1-206ENST00000487026 TFPTP0C1Z6 253 aa21.58■■□□□ 1.05
LIME1-206ENST00000487026 UQCRBP14927 111 aa21.58■■□□□ 1.05
LIME1-206ENST00000487026 CXCR1P25024 350 aa21.58■■□□□ 1.05
LIME1-206ENST00000487026 ACAA2P42765 397 aaKnown RBP21.58■■□□□ 1.05
LIME1-206ENST00000487026 BNIP2Q12982 314 aa21.58■■□□□ 1.05
LIME1-206ENST00000487026 CEACAM7Q14002 265 aa21.58■■□□□ 1.05
LIME1-206ENST00000487026 SLC17A1Q14916 467 aa21.58■■□□□ 1.05
LIME1-206ENST00000487026 TMEM108Q6UXF1 575 aa21.58■■□□□ 1.05
LIME1-206ENST00000487026 SSX8Q7RTT4 187 aa21.58■■□□□ 1.05
LIME1-206ENST00000487026 CLIP4Q8N3C7 705 aa21.58■■□□□ 1.05
LIME1-206ENST00000487026 CADM2Q8N3J6 435 aa21.58■■□□□ 1.05
LIME1-206ENST00000487026 TMEM99Q8N816 258 aa21.58■■□□□ 1.05
LIME1-206ENST00000487026 SLC38A5Q8WUX1 472 aa21.58■■□□□ 1.05
LIME1-206ENST00000487026 MUS81Q96NY9 551 aa21.58■■□□□ 1.05
LIME1-206ENST00000487026 REG4Q9BYZ8 158 aa21.58■■□□□ 1.05
LIME1-206ENST00000487026 SLC7A10Q9NS82 523 aa21.58■■□□□ 1.05
LIME1-206ENST00000487026 ZIM2Q9NZV7 527 aa21.58■■□□□ 1.05
LIME1-206ENST00000487026 UPB1Q9UBR1 384 aa21.58■■□□□ 1.05
LIME1-206ENST00000487026 DNHD1Q96M86 4753 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 KIAA1324LA8MWY0 1029 aaPredicted RBP21.57■■□□□ 1.04
LIME1-206ENST00000487026 E7EQL1 145 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 M0R1B8 84 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 UBDO15205 165 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 AKR7A3O95154 331 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 THBS1P07996 1170 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 PRG2P13727 222 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 POLR2JP52435 117 aaKnown RBP21.57■■□□□ 1.04
LIME1-206ENST00000487026 SLC18A1P54219 525 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 DSTNP60981 165 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 KRTAP1-1Q07627 177 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 OR7A5Q15622 319 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 GSTA3Q16772 222 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 LIN52Q52LA3 116 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 OTUD3Q5T2D3 398 aaPredicted RBP21.57■■□□□ 1.04
LIME1-206ENST00000487026 TSPO2Q5TGU0 170 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 SLC22A25Q6T423 547 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 DTX2Q86UW9 622 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 ZNF440Q8IYI8 595 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 WDR31Q8NA23 367 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 TLCD1Q96CP7 247 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 SDR39U1Q9NRG7 319 aaPredicted RBP21.57■■□□□ 1.04
LIME1-206ENST00000487026 FAIMQ9NVQ4 179 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 PARPBPQ9NWS1 579 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 B3GALT5Q9Y2C3 310 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 SLC9A8Q9Y2E8 581 aa21.57■■□□□ 1.04
LIME1-206ENST00000487026 DSPPQ9NZW4 1301 aa21.56■■□□□ 1.04
LIME1-206ENST00000487026 LIPT2A6NK58 231 aa21.56■■□□□ 1.04
LIME1-206ENST00000487026 PDLIM1O00151 329 aa21.56■■□□□ 1.04
LIME1-206ENST00000487026 ZCCHC18P0CG32 403 aa21.56■■□□□ 1.04
LIME1-206ENST00000487026 CD40P25942 277 aa21.56■■□□□ 1.04
LIME1-206ENST00000487026 ETFDHQ16134 617 aa21.56■■□□□ 1.04
LIME1-206ENST00000487026 C6orf10Q5SRN2 563 aa21.56■■□□□ 1.04
LIME1-206ENST00000487026 OR7E24Q6IFN5 339 aa21.56■■□□□ 1.04
LIME1-206ENST00000487026 PAQR6Q6TCH4 344 aa21.56■■□□□ 1.04
LIME1-206ENST00000487026 KLHL17Q6TDP4 642 aa21.56■■□□□ 1.04
LIME1-206ENST00000487026 ZIC4Q8N9L1 334 aa21.56■■□□□ 1.04
LIME1-206ENST00000487026 TMEM19Q96HH6 336 aa21.56■■□□□ 1.04
LIME1-206ENST00000487026 ITCHQ96J02 903 aa21.56■■□□□ 1.04
LIME1-206ENST00000487026 HS6ST2Q96MM7 605 aa21.56■■□□□ 1.04
LIME1-206ENST00000487026 RMND5AQ9H871 391 aa21.56■■□□□ 1.04
LIME1-206ENST00000487026 TMBIM4Q9HC24 238 aa21.56■■□□□ 1.04
LIME1-206ENST00000487026 CALML5Q9NZT1 146 aa21.56■■□□□ 1.04
LIME1-206ENST00000487026 POU2F3Q9UKI9 436 aa21.56■■□□□ 1.04
LIME1-206ENST00000487026 ZNF443Q9Y2A4 671 aaPredicted RBP21.56■■□□□ 1.04
LIME1-206ENST00000487026 CHST2Q9Y4C5 530 aa21.56■■□□□ 1.04
LIME1-206ENST00000487026 ALPK2Q86TB3 2170 aa21.55■■□□□ 1.04
LIME1-206ENST00000487026 ANK3Q12955 4377 aaKnown RBP21.55■■□□□ 1.04
LIME1-206ENST00000487026 GPIP06744 558 aa21.55■■□□□ 1.04
LIME1-206ENST00000487026 PTAFRP25105 342 aa21.55■■□□□ 1.04
LIME1-206ENST00000487026 MAP2K6P52564 334 aa21.55■■□□□ 1.04
LIME1-206ENST00000487026 CRISP3P54108 245 aa21.55■■□□□ 1.04
LIME1-206ENST00000487026 AGAP6Q5VW22 663 aa21.55■■□□□ 1.04
LIME1-206ENST00000487026 WBP2NLQ6ICG8 309 aa21.55■■□□□ 1.04
LIME1-206ENST00000487026 RADILQ96JH8 1075 aa21.55■■□□□ 1.04
LIME1-206ENST00000487026 ZNF385AQ96PM9 386 aaKnown RBP21.55■■□□□ 1.04
LIME1-206ENST00000487026 MGAT4BQ9UQ53 548 aa21.55■■□□□ 1.04
LIME1-206ENST00000487026 SSX4O60224 188 aa21.54■■□□□ 1.04
LIME1-206ENST00000487026 NUDT7P0C024 238 aa21.54■■□□□ 1.04
LIME1-206ENST00000487026 COPZ1P61923 177 aa21.54■■□□□ 1.04
LIME1-206ENST00000487026 SLC25A3Q00325 362 aa21.54■■□□□ 1.04
LIME1-206ENST00000487026 B3GLCTQ6Y288 498 aa21.54■■□□□ 1.04
LIME1-206ENST00000487026 GPAT4Q86UL3 456 aa21.54■■□□□ 1.04
LIME1-206ENST00000487026 MIER2Q8N344 545 aa21.54■■□□□ 1.04
LIME1-206ENST00000487026 OR9K2Q8NGE7 335 aa21.54■■□□□ 1.04
LIME1-206ENST00000487026 GRIP2Q9C0E4 1043 aa21.54■■□□□ 1.04
LIME1-206ENST00000487026 PCDHB14Q9Y5E9 798 aa21.54■■□□□ 1.04
LIME1-206ENST00000487026 PLCE1Q9P212 2302 aa21.54■■□□□ 1.04
LIME1-206ENST00000487026 CDH2P19022 906 aaPredicted RBP21.53■■□□□ 1.04
LIME1-206ENST00000487026 NCF2P19878 526 aaPredicted RBP21.53■■□□□ 1.04
LIME1-206ENST00000487026 TTKP33981 857 aa21.53■■□□□ 1.04
LIME1-206ENST00000487026 IRX1P78414 480 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms