RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 EEF1E1-BLOC1S5C9J1V9 151 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 H0YIV9 168 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 FOXE1O00358 373 aaPredicted RBP3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 EEF1E1O43324 174 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 SMPD2O60906 423 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 KERAO60938 352 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 EEDO75530 441 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 PRKRAO75569 313 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 CBR3O75828 277 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 SEC31AO94979 1220 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 LRATO95237 230 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 LY6G6DO95868 133 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 CRHP06850 196 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 ABCB1P08183 1280 aaPredicted RBP3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 GSTA2P09210 222 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 RHOXF2BP0C7M4 288 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 FAM58BPP0C7Q3 252 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 TCP1P17987 556 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 S1PR1P21453 382 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 CHMP24386 653 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 PIK3R1P27986 724 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 ABCD3P28288 659 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 PTPN6P29350 595 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 SPRP35270 261 aaPredicted RBP3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 BSGP35613 385 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 GP5P40197 560 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 SLCO1A2P46721 670 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 XKP51811 444 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 DIO3P55073 304 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 RAB10P61026 200 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 PHEXP78562 749 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 DR1Q01658 176 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 ALKBH1Q13686 389 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 DDX39BQ13838 428 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 FASTKD3Q14CZ7 662 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 TOMM20Q15388 145 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 ZKSCAN8Q15776 578 aaPredicted RBP3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 DCST1Q5T197 706 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 OR52E8Q6IFG1 317 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 METTL2BQ6P1Q9 378 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 CYP20A1Q6UW02 462 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 ENPP6Q6UWR7 440 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 ANGPTL8Q6UXH0 198 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 TMEM64Q6YI46 380 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 ZBED8Q8IZ13 594 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 SLC35F6Q8N357 371 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 RNF175Q8N4F7 328 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 SCAIQ8N9R8 606 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 L3MBTL4Q8NA19 623 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 FAM83FQ8NEG4 500 aaPredicted RBP3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 OR4N2Q8NGD1 307 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 OR4K14Q8NGD5 310 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 OR1J4Q8NGS1 313 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 DOK4Q8TEW6 326 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 PYROXD1Q8WU10 500 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 UCN3Q969E3 161 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 INTS12Q96CB8 462 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 DTNBP1Q96EV8 351 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 ATOH8Q96SQ7 321 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 MTERF1Q99551 399 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 RBBP8Q99708 897 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 CPNE1Q99829 537 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 TUBA1CQ9BQE3 449 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 OR2B2Q9GZK3 357 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 CXorf56Q9H5V9 222 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 METTL7AQ9H8H3 244 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 OBP2BQ9NPH6 170 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 SMYD2Q9NRG4 433 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 TXNDC16Q9P2K2 825 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 NLKQ9UBE8 527 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 EXO1Q9UQ84 846 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 CFL2Q9Y281 166 aa3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 MRPS18CQ9Y3D5 142 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-205ENST00000486941 MXRA5Q9NR99 2828 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 PLCE1Q9P212 2302 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 TCRBV9S1A1TA0A576 114 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 GOLGA6L10A6NI86 522 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 FAM90A20PA6NIJ5 464 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 FAM159BA6NKW6 160 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 SYCE1LA8MT33 242 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 EFCAB8A8MWE9 144 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 DEFB108AA8MXU0 73 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 SUPT3HB4E1H0 165 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 H0Y3Z8 333 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 CCDC188H7C350 402 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 UBXN8O00124 270 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 PGRMC2O15173 223 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 TO15178 435 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 ACOX3O15254 700 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 EIF3HO15372 352 aaKnown RBP eCLIP3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 ZSCAN12O43309 604 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 ICOSLGO75144 302 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 GUCY1B2O75343 617 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 SUPT3HO75486 399 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 TNFSF13O75888 250 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 PIAS1O75925 651 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 SEMA3DO95025 777 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 AIFM1O95831 613 aa3.53□□□□□ -1.84
SNRNP40-205ENST00000486941 CT62P0C5K7 136 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms