RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 CES2O00748 559 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 ITGB1BP1O14713 200 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 SCAMP2O15127 329 aaKnown RBP6.16□□□□□ -1.42
HDAC3-209ENST00000486618 ADAMDEC1O15204 470 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 CHST10O43529 356 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 GALR3O60755 368 aaPredicted RBP6.16□□□□□ -1.42
HDAC3-209ENST00000486618 MITFO75030 526 aaPredicted RBP6.16□□□□□ -1.42
HDAC3-209ENST00000486618 LY6G6DO95868 133 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 DHFRP00374 187 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 CHRM2P08172 466 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 SERPINA6P08185 405 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 OR4E1P0C645 316 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 ZNF10P21506 573 aaPredicted RBP6.16□□□□□ -1.42
HDAC3-209ENST00000486618 PTX3P26022 381 aaPredicted RBP6.16□□□□□ -1.42
HDAC3-209ENST00000486618 RYKP34925 604 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 NAA10P41227 235 aaPredicted RBP6.16□□□□□ -1.42
HDAC3-209ENST00000486618 GRIA1P42261 906 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 SLC1A3P43003 542 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 GNG10P50151 68 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 ASCL1P50553 236 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 PSMD4P55036 377 aaKnown RBP6.16□□□□□ -1.42
HDAC3-209ENST00000486618 REEP5Q00765 189 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 MVKQ03426 396 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 MALLQ13021 153 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 NFYCQ13952 458 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 RCAN2Q14206 197 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 SLC10A1Q14973 349 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 NRN1LQ496H8 165 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 ACSBG2Q5FVE4 666 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 HLA-DQA1Q5Y7H0 255 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 RTL6Q6ICC9 239 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 TMIGD1Q6UXZ0 262 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 CYP2R1Q6VVX0 501 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 GSTA5Q7RTV2 222 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 C17orf64Q86WR6 236 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 VSTM4Q8IW00 320 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 LRRC8AQ8IWT6 810 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 TIGD4Q8IY51 512 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 CENPLQ8N0S6 344 aaPredicted RBP6.16□□□□□ -1.42
HDAC3-209ENST00000486618 FAM109AQ8N4B1 249 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 FADS6Q8N9I5 356 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 MCUQ8NE86 351 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 NFAM1Q8NET5 270 aaPredicted RBP6.16□□□□□ -1.42
HDAC3-209ENST00000486618 B3GNT7Q8NFL0 401 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 OR2M7Q8NG81 312 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 OR5T3Q8NGG3 340 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 SLC35B2Q8TB61 432 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 ZNF473Q8WTR7 871 aaKnown RBP6.16□□□□□ -1.42
HDAC3-209ENST00000486618 GLYATL2Q8WU03 294 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 PROX1Q92786 737 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 RNASE6Q93091 150 aaKnown RBP6.16□□□□□ -1.42
HDAC3-209ENST00000486618 PPP1R36Q96LQ0 422 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 ASCL2Q99929 193 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 FAM173AQ9BQD7 235 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 WDR83Q9BRX9 315 aaKnown RBP6.16□□□□□ -1.42
HDAC3-209ENST00000486618 DGCR6LQ9BY27 220 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 TTTY12Q9BZ98 90 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 ATG10Q9H0Y0 220 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 SLC6A15Q9H2J7 730 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 OR51B6Q9H340 312 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 POFUT1Q9H488 388 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 SMURF2Q9HAU4 748 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 SEMA4BQ9NPR2 832 aaPredicted RBP6.16□□□□□ -1.42
HDAC3-209ENST00000486618 C20orf96Q9NUD7 363 aaPredicted RBP6.16□□□□□ -1.42
HDAC3-209ENST00000486618 SYBUQ9NX95 663 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 GRHL1Q9NZI5 618 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 KCMF1Q9P0J7 381 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 DAPK2Q9UIK4 370 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 SCOCQ9UIL1 159 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 CBLCQ9ULV8 474 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 SF3B6Q9Y3B4 125 aaKnown RBP6.16□□□□□ -1.42
HDAC3-209ENST00000486618 FAM215AQ9Y5M1 114 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 FREM3P0C091 2139 aa6.16□□□□□ -1.42
HDAC3-209ENST00000486618 NINQ8N4C6 2090 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 CD8B2A6NJW9 211 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 C22orf46C9J442 243 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 GFYI3L273 518 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 AKAP8O43823 692 aaKnown RBP6.15□□□□□ -1.42
HDAC3-209ENST00000486618 LCMT2O60294 686 aaKnown RBP6.15□□□□□ -1.42
HDAC3-209ENST00000486618 HCN1O60741 890 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 SNNO75324 88 aaPredicted RBP6.15□□□□□ -1.42
HDAC3-209ENST00000486618 AVILO75366 819 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 GPX5O75715 221 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 ZFAND5O76080 213 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 APRTP07741 180 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 CD3EP07766 207 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 LYNP07948 512 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 MPC1LP0DKB6 136 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 RNH1P13489 461 aaKnown RBP6.15□□□□□ -1.42
HDAC3-209ENST00000486618 CCL2P13500 99 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 ENO3P13929 434 aaPredicted RBP6.15□□□□□ -1.42
HDAC3-209ENST00000486618 IFNGR1P15260 489 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 GABRB1P18505 474 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 KRT15P19012 456 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 PRPS1L1P21108 318 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 CNR1P21554 472 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 TUBG1P23258 451 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 PCSK6P29122 969 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 IMPA1P29218 277 aa6.15□□□□□ -1.42
HDAC3-209ENST00000486618 COILP38432 576 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms