RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 CARD8Q9Y2G2 431 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 FLVCR1Q9Y5Y0 555 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 NOTCH3Q9UM47 2321 aa7.01□□□□□ -1.29
XRN1-212ENST00000486211 SACSQ9NZJ4 4579 aa7□□□□□ -1.29
XRN1-212ENST00000486211 TRIM49D1C9J1S8 452 aa7□□□□□ -1.29
XRN1-212ENST00000486211 HOXA3O43365 443 aaPredicted RBP7□□□□□ -1.29
XRN1-212ENST00000486211 PDYNP01213 254 aa7□□□□□ -1.29
XRN1-212ENST00000486211 IFI6P09912 130 aa7□□□□□ -1.29
XRN1-212ENST00000486211 ACP2P11117 423 aa7□□□□□ -1.29
XRN1-212ENST00000486211 HPGDP15428 266 aa7□□□□□ -1.29
XRN1-212ENST00000486211 PAX7P23759 505 aa7□□□□□ -1.29
XRN1-212ENST00000486211 LCN1P31025 176 aa7□□□□□ -1.29
XRN1-212ENST00000486211 ALDH18A1P54886 795 aaKnown RBP7□□□□□ -1.29
XRN1-212ENST00000486211 H3F3AP84243 136 aa7□□□□□ -1.29
XRN1-212ENST00000486211 IFT88Q13099 833 aa7□□□□□ -1.29
XRN1-212ENST00000486211 SNTB2Q13425 540 aaKnown RBP7□□□□□ -1.29
XRN1-212ENST00000486211 MAD2L1BPQ15013 274 aaPredicted RBP7□□□□□ -1.29
XRN1-212ENST00000486211 QPRTQ15274 297 aa7□□□□□ -1.29
XRN1-212ENST00000486211 TIGD2Q4W5G0 525 aa7□□□□□ -1.29
XRN1-212ENST00000486211 KLHL26Q53HC5 615 aa7□□□□□ -1.29
XRN1-212ENST00000486211 SYT14P1Q58G82 188 aa7□□□□□ -1.29
XRN1-212ENST00000486211 REP15Q6BDI9 236 aa7□□□□□ -1.29
XRN1-212ENST00000486211 MTERF4Q7Z6M4 381 aaKnown RBP7□□□□□ -1.29
XRN1-212ENST00000486211 POU5F2Q8N7G0 328 aa7□□□□□ -1.29
XRN1-212ENST00000486211 NOA1Q8NC60 698 aaKnown RBP7□□□□□ -1.29
XRN1-212ENST00000486211 BHLHE22Q8NFJ8 381 aaPredicted RBP7□□□□□ -1.29
XRN1-212ENST00000486211 LINC01006Q8NI28 216 aa7□□□□□ -1.29
XRN1-212ENST00000486211 PHOSPHO1Q8TCT1 267 aa7□□□□□ -1.29
XRN1-212ENST00000486211 EPS8L3Q8TE67 593 aaKnown RBP7□□□□□ -1.29
XRN1-212ENST00000486211 BCL2L2Q92843 193 aaPredicted RBP7□□□□□ -1.29
XRN1-212ENST00000486211 MAGOHBQ96A72 148 aaKnown RBP7□□□□□ -1.29
XRN1-212ENST00000486211 BBS4Q96RK4 519 aa7□□□□□ -1.29
XRN1-212ENST00000486211 DESI2Q9BSY9 194 aa7□□□□□ -1.29
XRN1-212ENST00000486211 KRTAP4-7Q9BYR0 210 aa7□□□□□ -1.29
XRN1-212ENST00000486211 SHCBP1LQ9BZQ2 653 aa7□□□□□ -1.29
XRN1-212ENST00000486211 GLIPR2Q9H4G4 154 aa7□□□□□ -1.29
XRN1-212ENST00000486211 PRDM13Q9H4Q3 707 aa7□□□□□ -1.29
XRN1-212ENST00000486211 BRF2Q9HAW0 419 aa7□□□□□ -1.29
XRN1-212ENST00000486211 NMRAL1Q9HBL8 299 aa7□□□□□ -1.29
XRN1-212ENST00000486211 NOX3Q9HBY0 568 aa7□□□□□ -1.29
XRN1-212ENST00000486211 EQTNQ9NQ60 294 aa7□□□□□ -1.29
XRN1-212ENST00000486211 MMP26Q9NRE1 261 aa7□□□□□ -1.29
XRN1-212ENST00000486211 NECAP2Q9NVZ3 263 aa7□□□□□ -1.29
XRN1-212ENST00000486211 MYEF2Q9P2K5 600 aaKnown RBP7□□□□□ -1.29
XRN1-212ENST00000486211 ASH2LQ9UBL3 628 aa7□□□□□ -1.29
XRN1-212ENST00000486211 LEF1Q9UJU2 399 aaPredicted RBP7□□□□□ -1.29
XRN1-212ENST00000486211 CMAHPQ9Y471 501 aa7□□□□□ -1.29
XRN1-212ENST00000486211 WIPI2Q9Y4P8 454 aa7□□□□□ -1.29
XRN1-212ENST00000486211 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 SRRM5B3KS81 715 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 DNALI1O14645 258 aaPredicted RBP6.99□□□□□ -1.29
XRN1-212ENST00000486211 TRAF3IP2O43734 574 aaPredicted RBP6.99□□□□□ -1.29
XRN1-212ENST00000486211 CDC14BO60729 498 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 DNAJA2O60884 412 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 LGI1O95970 557 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 CSF1P09603 554 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 IGHV4-38-2P0DP08 117 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 MAGEB1P43366 347 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 MTNR1AP48039 350 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 UBE2NP61088 152 aaKnown RBP6.99□□□□□ -1.29
XRN1-212ENST00000486211 ZNF154Q13106 437 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 DAG1Q14118 895 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 HEPACAMQ14CZ8 416 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 DUSP5Q16690 384 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 GGTA1PQ4G0N0 100 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.99□□□□□ -1.29
XRN1-212ENST00000486211 CCNJQ5T5M9 372 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 TTC19Q6DKK2 380 aaPredicted RBP6.99□□□□□ -1.29
XRN1-212ENST00000486211 KRT80Q6KB66 452 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 METTL2BQ6P1Q9 378 aaKnown RBP6.99□□□□□ -1.29
XRN1-212ENST00000486211 CCDC137Q6PK04 289 aaKnown RBP6.99□□□□□ -1.29
XRN1-212ENST00000486211 FIP1L1Q6UN15 594 aaKnown RBP6.99□□□□□ -1.29
XRN1-212ENST00000486211 LRP11Q86VZ4 500 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 OR6Y1Q8NGX8 325 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 RHEBL1Q8TAI7 183 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 MAGEE2Q8TD90 523 aaPredicted RBP6.99□□□□□ -1.29
XRN1-212ENST00000486211 C16orf78Q8WTQ4 265 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 PPP1R14AQ96A00 147 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 TMEM45BQ96B21 275 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 GIMAP5Q96F15 307 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 ARL5BQ96KC2 179 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 AMDHD1Q96NU7 426 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 SYT3Q9BQG1 590 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 MS4A7Q9GZW8 240 aaPredicted RBP6.99□□□□□ -1.29
XRN1-212ENST00000486211 ELOVL6Q9H5J4 265 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 ZNF385DQ9H6B1 395 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 PARPBPQ9NWS1 579 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 NSMCE4AQ9NXX6 385 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 PURGQ9UJV8 347 aaKnown RBP6.99□□□□□ -1.29
XRN1-212ENST00000486211 SLC9A8Q9Y2E8 581 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 AUP1Q9Y679 476 aa6.99□□□□□ -1.29
XRN1-212ENST00000486211 ZNF503-AS2A6NEH8 195 aa6.98□□□□□ -1.29
XRN1-212ENST00000486211 SYCE1LA8MT33 242 aa6.98□□□□□ -1.29
XRN1-212ENST00000486211 GOLGA6L22H0YM25 854 aa6.98□□□□□ -1.29
XRN1-212ENST00000486211 TRAPPC2LH3BP13 241 aa6.98□□□□□ -1.29
XRN1-212ENST00000486211 DNPH1O43598 174 aa6.98□□□□□ -1.29
XRN1-212ENST00000486211 PCDH7O60245 1069 aa6.98□□□□□ -1.29
XRN1-212ENST00000486211 PPP1R3DO95685 299 aa6.98□□□□□ -1.29
XRN1-212ENST00000486211 PMS2P2O95744 297 aa6.98□□□□□ -1.29
XRN1-212ENST00000486211 PLATP00750 562 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms