RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 SSX8Q7RTT4 187 aa16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 SERPINA11Q86U17 422 aa16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 P2RY8Q86VZ1 359 aa16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 ZNF433Q8N7K0 673 aaPredicted RBP16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 ZNF611Q8N823 705 aa16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 IGFBPL1Q8WX77 278 aa16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 AKAP1Q92667 903 aaKnown RBP eCLIP16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 MUCL1Q96DR8 90 aa16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 PARPBPQ9NWS1 579 aa16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 ZNF469Q96JG9 3925 aaPredicted RBP16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 TRBV5-3A0A0A0MS03 114 aa16.25■□□□□ 0.19
PRPF40A-209ENST00000486100 LIPT2A6NK58 231 aa16.25■□□□□ 0.19
PRPF40A-209ENST00000486100 IGHV3-9P01782 118 aa16.25■□□□□ 0.19
PRPF40A-209ENST00000486100 CD3EP07766 207 aa16.25■□□□□ 0.19
PRPF40A-209ENST00000486100 ARAFP10398 606 aa16.25■□□□□ 0.19
PRPF40A-209ENST00000486100 BNIP2Q12982 314 aa16.25■□□□□ 0.19
PRPF40A-209ENST00000486100 PPA1Q15181 289 aa16.25■□□□□ 0.19
PRPF40A-209ENST00000486100 STK11Q15831 433 aa16.25■□□□□ 0.19
PRPF40A-209ENST00000486100 GCNT6Q5T4J0 391 aa16.25■□□□□ 0.19
PRPF40A-209ENST00000486100 PRSS57Q6UWY2 283 aa16.25■□□□□ 0.19
PRPF40A-209ENST00000486100 SEZ6L2Q6UXD5 910 aa16.25■□□□□ 0.19
PRPF40A-209ENST00000486100 LSRQ86X29 649 aaPredicted RBP16.25■□□□□ 0.19
PRPF40A-209ENST00000486100 ASB6Q9NWX5 421 aa16.25■□□□□ 0.19
PRPF40A-209ENST00000486100 RNF115Q9Y4L5 304 aa16.25■□□□□ 0.19
PRPF40A-209ENST00000486100 FLVCR1Q9Y5Y0 555 aa16.25■□□□□ 0.19
PRPF40A-209ENST00000486100 DPRXA6NFQ7 191 aa16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 EVPLLA8MZ36 301 aa16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 TMCC2O75069 709 aa16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 GPX2P18283 190 aa16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 ADSLP30566 484 aaPredicted RBP16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 PRKAR1BP31321 381 aa16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 CDK6Q00534 326 aa16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 OR7A5Q15622 319 aa16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 Q5PR19 223 aa16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 OTUD3Q5T2D3 398 aaPredicted RBP16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 REEP3Q6NUK4 255 aa16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 C10orf111Q8N326 155 aa16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 TMEM99Q8N816 258 aa16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 LILRB1Q8NHL6 650 aaPredicted RBP16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 NFKBIDQ8NI38 313 aa16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 TMEM171Q8WVE6 324 aa16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 C3orf49Q96BT1 292 aa16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 THOC1Q96FV9 657 aaKnown RBP16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 SF3B5Q9BWJ5 86 aaKnown RBP16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 TAPBPLQ9BX59 468 aa16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 GSX2Q9BZM3 304 aa16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 MALT1Q9UDY8 824 aa16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 CORO2BQ9UQ03 480 aa16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 SLC9A8Q9Y2E8 581 aa16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 VPS13CQ709C8 3753 aa16.24■□□□□ 0.19
PRPF40A-209ENST00000486100 CIB4A0PJX0 185 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 OR5H1A6NKK0 313 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 CCT8L1PA6NM43 557 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 CLOCKO15516 846 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 EDF1O60869 148 aaKnown RBP16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 NPIPB7O75200 414 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 SASH3O75995 380 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 AKR7A3O95154 331 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 PAX1P15863 534 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 HOXC5Q00444 222 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 FAPQ12884 760 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 C1orf140Q5VVS0 124 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 CASP12Q6UXS9 341 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 DLEU7Q6UYE1 221 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 ATG4DQ86TL0 474 aaPredicted RBP16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 KRT73Q86Y46 540 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 STK35Q8TDR2 534 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 PERPQ96FX8 193 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 C18orf12Q96KH6 178 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 SPATA5L1Q9BVQ7 753 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 RSPO3Q9BXY4 272 aaPredicted RBP16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 IKZF5Q9H5V7 419 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 PIF1Q9H611 641 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 TMEM38AQ9H6F2 299 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 TAS2R16Q9NYV7 291 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 LEF1Q9UJU2 399 aaPredicted RBP16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 DCTN4Q9UJW0 460 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 TRIM33Q9UPN9 1127 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 FREM1Q5H8C1 2179 aa16.23■□□□□ 0.19
PRPF40A-209ENST00000486100 MTORP42345 2549 aa16.22■□□□□ 0.19
PRPF40A-209ENST00000486100 AQP7P3A6NL99 342 aa16.22■□□□□ 0.19
PRPF40A-209ENST00000486100 FRS3O43559 492 aa16.22■□□□□ 0.19
PRPF40A-209ENST00000486100 RAD51DO75771 328 aa16.22■□□□□ 0.19
PRPF40A-209ENST00000486100 BSPH1Q075Z2 132 aa16.22■□□□□ 0.19
PRPF40A-209ENST00000486100 RUNDC3AQ59EK9 446 aa16.22■□□□□ 0.19
PRPF40A-209ENST00000486100 TMEM225Q6GV28 225 aa16.22■□□□□ 0.19
PRPF40A-209ENST00000486100 OR7E24Q6IFN5 339 aa16.22■□□□□ 0.19
PRPF40A-209ENST00000486100 DHRS4L2Q6PKH6 230 aa16.22■□□□□ 0.19
PRPF40A-209ENST00000486100 ZIC4Q8N9L1 334 aa16.22■□□□□ 0.19
PRPF40A-209ENST00000486100 OR52E4Q8NGH9 312 aa16.22■□□□□ 0.19
PRPF40A-209ENST00000486100 TMEM45BQ96B21 275 aa16.22■□□□□ 0.19
PRPF40A-209ENST00000486100 MUS81Q96NY9 551 aa16.22■□□□□ 0.19
PRPF40A-209ENST00000486100 SIKE1Q9BRV8 207 aa16.22■□□□□ 0.19
PRPF40A-209ENST00000486100 GSX1Q9H4S2 264 aaPredicted RBP16.22■□□□□ 0.19
PRPF40A-209ENST00000486100 CXorf56Q9H5V9 222 aa16.22■□□□□ 0.19
PRPF40A-209ENST00000486100 ZNF385DQ9H6B1 395 aa16.22■□□□□ 0.19
PRPF40A-209ENST00000486100 ZNF701Q9NV72 531 aaPredicted RBP16.22■□□□□ 0.19
PRPF40A-209ENST00000486100 UPB1Q9UBR1 384 aa16.22■□□□□ 0.19
PRPF40A-209ENST00000486100 NDUFAF1Q9Y375 327 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms