RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 CFAP221Q4G0U5 840 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 ATL3Q6DD88 541 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 TMEM225Q6GV28 225 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 CCDC137Q6PK04 289 aaKnown RBP1.89□□□□□ -2.11
GCFC2-209ENST00000486016 LCA5Q86VQ0 697 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 TMEM123Q8N131 208 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 SVOPLQ8N434 492 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 ARL6IP6Q8N6S5 226 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 ATP6V0D2Q8N8Y2 350 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 CATSPER1Q8NEC5 780 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 STEAP2Q8NFT2 490 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 OR4D9Q8NGE8 314 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 OR52M1Q8NGK5 317 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 OR4D5Q8NGN0 318 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 ANKRD49Q8WVL7 239 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 EMG1Q92979 244 aaKnown RBP1.89□□□□□ -2.11
GCFC2-209ENST00000486016 TGM7Q96PF1 710 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 ZNF670Q9BS34 389 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 SLC35A5Q9BS91 424 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 NIPSNAP3BQ9BS92 247 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 SPATA16Q9BXB7 569 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 IL36GQ9NZH8 169 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 CD274Q9NZQ7 290 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 PIPOXQ9P0Z9 390 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 TBK1Q9UHD2 729 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 TMCC3Q9ULS5 477 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 RPH3ALQ9UNE2 315 aa1.89□□□□□ -2.11
GCFC2-209ENST00000486016 DDX49Q9Y6V7 483 aaKnown RBP1.89□□□□□ -2.11
GCFC2-209ENST00000486016 FBN1P35555 2871 aaKnown RBP1.89□□□□□ -2.11
GCFC2-209ENST00000486016 TMEM110-MUSTN1A8MSY1 372 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 GPR89AB7ZAQ6 455 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 E7ESA3 106 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 ARPC3O15145 178 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 ZNF264O43296 627 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 N4BP1O75113 896 aaKnown RBP1.88□□□□□ -2.11
GCFC2-209ENST00000486016 MTX2O75431 263 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 ECI2O75521 394 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 RHOBTB1O94844 696 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 IGHG4P01861 327 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 MMP1P03956 469 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 GPR89BP0CG08 455 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 PNMTP11086 282 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 FGF9P31371 208 aaPredicted RBP1.88□□□□□ -2.11
GCFC2-209ENST00000486016 YWHABP31946 246 aaKnown RBP1.88□□□□□ -2.11
GCFC2-209ENST00000486016 PRPHP41219 470 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 TDO2P48775 406 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 HNMTP50135 292 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 DAP3P51398 398 aaKnown RBP1.88□□□□□ -2.11
GCFC2-209ENST00000486016 RPS14P62263 151 aaKnown RBP1.88□□□□□ -2.11
GCFC2-209ENST00000486016 SPIBQ01892 262 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 MAP2K1Q02750 393 aaPredicted RBP1.88□□□□□ -2.11
GCFC2-209ENST00000486016 CHRNB3Q05901 458 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 CCDC173Q0VFZ6 552 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 C1orf61Q13536 156 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 MESDQ14696 234 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 GANABQ14697 944 aaKnown RBP1.88□□□□□ -2.11
GCFC2-209ENST00000486016 TRIM16LQ309B1 348 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 TPGS2Q68CL5 300 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 WDR74Q6RFH5 385 aaPredicted RBP1.88□□□□□ -2.11
GCFC2-209ENST00000486016 SYT10Q6XYQ8 523 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 CCDC80Q76M96 950 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 FAM220AQ7Z4H9 259 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 PPP1R42Q7Z4L9 355 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 TMEM110Q86TL2 294 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 LINC01551Q86U37 167 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 VSTM4Q8IW00 320 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 NRMQ8IXM6 262 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 TBC1D21Q8IYX1 336 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 CLEC4FQ8N1N0 589 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 FAM133AQ8N9E0 248 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 OR56B4Q8NH76 319 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 TCTEX1D2Q8WW35 142 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 PIGCQ92535 297 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 MRPS31Q92665 395 aaKnown RBP1.88□□□□□ -2.11
GCFC2-209ENST00000486016 KLHDC3Q9BQ90 382 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 TUBGCP2Q9BSJ2 902 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 CRACR2AQ9BSW2 395 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 SMYD3Q9H7B4 428 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 GORASP2Q9H8Y8 452 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 UFSP2Q9NUQ7 469 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 NUDT15Q9NV35 164 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 SMPD3Q9NY59 655 aaPredicted RBP1.88□□□□□ -2.11
GCFC2-209ENST00000486016 DCDC2Q9UHG0 476 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 MEMO1Q9Y316 297 aa1.88□□□□□ -2.11
GCFC2-209ENST00000486016 DHX57Q6P158 1386 aaKnown RBP1.87□□□□□ -2.11
GCFC2-209ENST00000486016 C15orf38-AP3S2A0A0A6YYH1 394 aa1.87□□□□□ -2.11
GCFC2-209ENST00000486016 A0A0G2JRQ6 117 aa1.87□□□□□ -2.11
GCFC2-209ENST00000486016 CXCL13O43927 109 aa1.87□□□□□ -2.11
GCFC2-209ENST00000486016 OR10H3O60404 316 aa1.87□□□□□ -2.11
GCFC2-209ENST00000486016 SNNO75324 88 aaPredicted RBP1.87□□□□□ -2.11
GCFC2-209ENST00000486016 INSP01308 110 aa1.87□□□□□ -2.11
GCFC2-209ENST00000486016 PCCAP05165 728 aaPredicted RBP1.87□□□□□ -2.11
GCFC2-209ENST00000486016 IMPDH1P20839 514 aa1.87□□□□□ -2.11
GCFC2-209ENST00000486016 PCMT1P22061 227 aa1.87□□□□□ -2.11
GCFC2-209ENST00000486016 GLRA2P23416 452 aa1.87□□□□□ -2.11
GCFC2-209ENST00000486016 UGT1A5P35504 534 aa1.87□□□□□ -2.11
GCFC2-209ENST00000486016 PTGDSP41222 190 aa1.87□□□□□ -2.11
GCFC2-209ENST00000486016 CASP4P49662 377 aa1.87□□□□□ -2.11
GCFC2-209ENST00000486016 GBX2P52951 348 aaPredicted RBP1.87□□□□□ -2.11
GCFC2-209ENST00000486016 PLK1P53350 603 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms