RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 MCUR1Q96AQ8 359 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 ZNF300Q96RE9 604 aaPredicted RBP10.61□□□□□ -0.71
APTX-227ENST00000485479 PRSS27Q9BQR3 290 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 C12orf49Q9H741 205 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 SELENONQ9NZV5 590 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 STOML1Q9UBI4 398 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 SLC7A8Q9UHI5 535 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 RPS6KA6Q9UK32 745 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 MCTS1Q9ULC4 181 aaKnown RBP10.61□□□□□ -0.71
APTX-227ENST00000485479 SAMD4AQ9UPU9 718 aaKnown RBP10.61□□□□□ -0.71
APTX-227ENST00000485479 SPIN1Q9Y657 262 aaPredicted RBP10.61□□□□□ -0.71
APTX-227ENST00000485479 SPTAN1Q13813 2472 aaKnown RBP10.61□□□□□ -0.71
APTX-227ENST00000485479 A0A087WUJ7 227 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 CLEC18AA5D8T8 446 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 TRAPPC13A5PLN9 417 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 A8MVM7 634 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 EEF1E1-BLOC1S5C9J1V9 151 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 ACOT8O14734 319 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 EEF1E1O43324 174 aaKnown RBP10.61□□□□□ -0.71
APTX-227ENST00000485479 CHP2O43745 196 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 SYNGR4O95473 234 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 CLDN1O95832 211 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 TMIGD3P0DMS9 266 aaPredicted RBP10.61□□□□□ -0.71
APTX-227ENST00000485479 EDNRAP25101 427 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 COL8A1P27658 744 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 PPP1R8Q12972 351 aaKnown RBP10.61□□□□□ -0.71
APTX-227ENST00000485479 CLEC18BQ6UXF7 455 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 CCDC121Q6ZUS5 278 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 FCRLAQ7L513 359 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 LUZP2Q86TE4 346 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 RELL2Q8NC24 303 aaPredicted RBP10.61□□□□□ -0.71
APTX-227ENST00000485479 CLEC18CQ8NCF0 446 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 OR52J3Q8NH60 311 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 CA5BP1Q8WTZ4 195 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 SLC25A43Q8WUT9 341 aaPredicted RBP10.61□□□□□ -0.71
APTX-227ENST00000485479 DNAJA4Q8WW22 397 aaPredicted RBP10.61□□□□□ -0.71
APTX-227ENST00000485479 CPNE4Q96A23 557 aaPredicted RBP10.61□□□□□ -0.71
APTX-227ENST00000485479 ASB9Q96DX5 294 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 SLC47A1Q96FL8 570 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 MOGAT1Q96PD6 335 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 RNF122Q9H9V4 155 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 CALHM2Q9HA72 323 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 C20orf141Q9NUB4 165 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 NDUFAF4Q9P032 175 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 ACTR3BQ9P1U1 418 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 RIMS3Q9UJD0 308 aa10.61□□□□□ -0.71
APTX-227ENST00000485479 BAHCC1Q9P281 2608 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 TCRBV5S2A0A599 114 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 EBAG9O00559 213 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 ZNF208O43345 1280 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 NPIPB7O75200 414 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 SMNDC1O75940 238 aaKnown RBP eCLIP10.6□□□□□ -0.71
APTX-227ENST00000485479 PLGP00747 810 aaPredicted RBP10.6□□□□□ -0.71
APTX-227ENST00000485479 FUT1P19526 365 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 CEACAM8P31997 349 aaPredicted RBP10.6□□□□□ -0.71
APTX-227ENST00000485479 PTGER4P35408 488 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 IDUAP35475 653 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 UGT2B15P54855 530 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 RAC3P60763 192 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 LTBQ06643 244 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 PGM2L1Q6PCE3 622 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 ZNF613Q6PF04 617 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 TBPL2Q6SJ96 375 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 TUSC5Q8IXB3 177 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 TMEM99Q8N816 258 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 RNF128Q8TEB7 428 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 WNT2BQ93097 391 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 PYURFQ96I23 114 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 PRRC1Q96M27 445 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 MAN2C1Q9NTJ4 1040 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 COQ3Q9NZJ6 369 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 TESMINQ9Y4I5 508 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 DOPEY1Q5JWR5 2465 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 FREM1Q5H8C1 2179 aa10.6□□□□□ -0.71
APTX-227ENST00000485479 LIPT2A6NK58 231 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 C19orf84I3L1E1 186 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 FMO6PO60774 539 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 TNFSF13O75888 250 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 AHSA1O95433 338 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 SEMG1P04279 462 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 TIMP3P35625 211 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 FLOT2Q14254 428 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 PDSS1Q5T2R2 415 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 TMEM211Q6ICI0 200 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 LCN8Q6JVE9 175 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 GPAT4Q86UL3 456 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 EID3Q8N140 333 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 C10orf53Q8N6V4 93 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 LRRC17Q8N6Y2 441 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 UTP4Q969X6 686 aaKnown RBP10.59□□□□□ -0.71
APTX-227ENST00000485479 C7orf34Q96L11 122 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 OPN3Q9H1Y3 402 aaPredicted RBP10.59□□□□□ -0.71
APTX-227ENST00000485479 LRMDAQ9H2I8 198 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 MEPEQ9NQ76 525 aaPredicted RBP10.59□□□□□ -0.71
APTX-227ENST00000485479 C6orf203Q9P0P8 240 aaPredicted RBP10.59□□□□□ -0.71
APTX-227ENST00000485479 ING1Q9UK53 422 aaPredicted RBP10.59□□□□□ -0.71
APTX-227ENST00000485479 POMPQ9Y244 141 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 HDGFL3Q9Y3E1 203 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 A0A1W2PNV4 684 aa10.59□□□□□ -0.71
APTX-227ENST00000485479 WIPF3A6NGB9 483 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms