RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ZNF621Q6ZSS3 439 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 HMGN2P46Q86SG4 172 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 FBXL14Q8N1E6 418 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 SPATA3Q8NHX4 192 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 RHNO1Q9BSD3 238 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 THAP1Q9NVV9 213 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 DSPPQ9NZW4 1301 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 A0A096LNT2 108 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 ELOA3DA6NLF2 546 aaPredicted RBP10.06□□□□□ -0.8
SCFD1-206ENST00000484733 HDAC3O15379 428 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 SNNO75324 88 aaPredicted RBP10.06□□□□□ -0.8
SCFD1-206ENST00000484733 TP53P04637 393 aaPredicted RBP10.06□□□□□ -0.8
SCFD1-206ENST00000484733 NR2F1P10589 423 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 IL7RP16871 459 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 CCNA2P20248 432 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 PAX7P23759 505 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 MVDP53602 400 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 FOXG1P55316 489 aaPredicted RBP10.06□□□□□ -0.8
SCFD1-206ENST00000484733 ELOA3BQ3SY89 546 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 COX20Q5RI15 118 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 CEP85LQ5SZL2 805 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 MRPL2Q5T653 305 aaKnown RBP10.06□□□□□ -0.8
SCFD1-206ENST00000484733 HHATQ5VTY9 493 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 SLC22A25Q6T423 547 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 CASP12Q6UXS9 341 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 MSANTD1Q6ZTZ1 278 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 CXXC5Q7LFL8 322 aaKnown RBP10.06□□□□□ -0.8
SCFD1-206ENST00000484733 PEX5LQ8IYB4 626 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 PIAS4Q8N2W9 510 aaPredicted RBP10.06□□□□□ -0.8
SCFD1-206ENST00000484733 ELOA3Q8NG57 546 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 OR52E4Q8NGH9 312 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 SLC7A10Q9NS82 523 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 UPB1Q9UBR1 384 aa10.06□□□□□ -0.8
SCFD1-206ENST00000484733 DNHD1Q96M86 4753 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 LIPT2A6NK58 231 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 H7C417 338 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 GPIP06744 558 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 MPGP29372 298 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 SLC18A1P54219 525 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 NME5P56597 212 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 TGFBR3Q03167 851 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 LIN52Q52LA3 116 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 TSPO2Q5TGU0 170 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 B3GLCTQ6Y288 498 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 ZIC4Q8N9L1 334 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 MAPK1IP1LQ8NDC0 245 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 MAELQ96JY0 434 aaKnown RBP10.05□□□□□ -0.8
SCFD1-206ENST00000484733 CACNG6Q9BXT2 260 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 THUMPD1Q9NXG2 353 aaKnown RBP10.05□□□□□ -0.8
SCFD1-206ENST00000484733 P2RX2Q9UBL9 471 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 ZC3H12DA2A288 527 aaKnown RBP10.05□□□□□ -0.8
SCFD1-206ENST00000484733 CDHR4A6H8M9 788 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 M0R1B8 84 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 RFXANKO14593 260 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 CXCR1P25024 350 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 ACAA2P42765 397 aaKnown RBP10.05□□□□□ -0.8
SCFD1-206ENST00000484733 FABP6P51161 128 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 WDR4P57081 412 aaKnown RBP10.05□□□□□ -0.8
SCFD1-206ENST00000484733 OTUD3Q5T2D3 398 aaPredicted RBP10.05□□□□□ -0.8
SCFD1-206ENST00000484733 RNF220Q5VTB9 566 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 HIPK1Q86Z02 1210 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 MUC15Q8N387 334 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 POMGNT2Q8NAT1 580 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 FKRPQ9H9S5 495 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 OBP2BQ9NPH6 170 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 ZIM2Q9NZV7 527 aa10.05□□□□□ -0.8
SCFD1-206ENST00000484733 AQP7P3A6NL99 342 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 SSX4O60224 188 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 WNT11O96014 354 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 GSNP06396 782 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 IDO1P14902 403 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 NUDT6P53370 316 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 PRPS1P60891 318 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 LOXL1Q08397 574 aaPredicted RBP10.04□□□□□ -0.8
SCFD1-206ENST00000484733 SPOCK1Q08629 439 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 WBP2NLQ6ICG8 309 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 ABHD12BQ7Z5M8 362 aaPredicted RBP10.04□□□□□ -0.8
SCFD1-206ENST00000484733 OR9K2Q8NGE7 335 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 OR52P1PQ8NH57 321 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 DNAJA3Q96EY1 480 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 PAIP2Q9BPZ3 127 aaKnown RBP10.04□□□□□ -0.8
SCFD1-206ENST00000484733 WDR55Q9H6Y2 383 aaPredicted RBP10.04□□□□□ -0.8
SCFD1-206ENST00000484733 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.04□□□□□ -0.8
SCFD1-206ENST00000484733 POU2F3Q9UKI9 436 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 V9GYY5 206 aaPredicted RBP10.04□□□□□ -0.8
SCFD1-206ENST00000484733 CADP27708 2225 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 IGHV4-30-2A0A087WSY4 118 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 A0A096LPI6 279 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 A8MVM7 634 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 SLC22A3O75751 556 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 VAMP5O95183 116 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 TFPTP0C1Z6 253 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 SLC25A16P16260 332 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 EPHA3P29320 983 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 APOBEC3AP31941 199 aaPredicted RBP10.04□□□□□ -0.8
SCFD1-206ENST00000484733 P2RY4P51582 365 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 CRISP3P54108 245 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 CHRNB3Q05901 458 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 CEACAM7Q14002 265 aa10.04□□□□□ -0.8
SCFD1-206ENST00000484733 ATG16L1Q676U5 607 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms