RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-222	ENST00000483882	SLC13A4	Q9UKG4	626 aa		13.36	□□□□□ -0.27
NR1H3-222	ENST00000483882	EDAR	Q9UNE0	448 aa		13.36	□□□□□ -0.27
NR1H3-222	ENST00000483882	TMED7	Q9Y3B3	224 aa		13.36	□□□□□ -0.27
NR1H3-222	ENST00000483882	HEATR5A	Q86XA9	2040 aa		13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	ARHGAP21	Q5T5U3	1957 aa		13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	TMEM72	A0PK05	275 aa		13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	EEF1E1-BLOC1S5	C9J1V9	151 aa		13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	LINC01387	J3KSC0	135 aa		13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	EEF1E1	O43324	174 aa	Known RBP	13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	SEMG1	P04279	462 aa		13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	CCNA2	P20248	432 aa		13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	APOBEC1	P41238	236 aa	Known RBP	13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	SRY	Q05066	204 aa		13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	FBXL19-AS1	Q494R0	122 aa		13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	ENTPD8	Q5MY95	495 aa		13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	LCN8	Q6JVE9	175 aa		13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	CYP2R1	Q6VVX0	501 aa		13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	ADGRE4P	Q86SQ3	457 aa		13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	UBQLNL	Q8IYU4	475 aa		13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	LILRA2	Q8N149	483 aa		13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	ATP6V1C2	Q8NEY4	427 aa		13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	PROX1	Q92786	737 aa		13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	C7orf34	Q96L11	122 aa		13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	NSMCE2	Q96MF7	247 aa		13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	OR11A1	Q9GZK7	315 aa		13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882	COQ10B	Q9H8M1	238 aa		13.35	□□□□□ -0.27
NR1H3-222	ENST00000483882		A0A0B4J2E0	115 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882		A0A1B0GX12	115 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	ZC3H12D	A2A288	527 aa	Known RBP	13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	FAM221A	A4D161	298 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	TUBAL3	A6NHL2	446 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	CD8B2	A6NJW9	211 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882		J3KTA2	159 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	ADAMDEC1	O15204	470 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	SEC14L5	O43304	696 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	FMO6P	O60774	539 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	KLK2	P20151	261 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	CTSS	P25774	331 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	SFTPD	P35247	375 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	GCK	P35557	465 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	POLR2H	P52434	150 aa	Known RBP	13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	SELENBP1	Q13228	472 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	IFI44L	Q53G44	452 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	WDR88	Q6ZMY6	472 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	DHFR2	Q86XF0	187 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	KIF18B	Q86Y91	864 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	LINC01560	Q8TB33	94 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	ASB9	Q96DX5	294 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	ZNF845	Q96IR2	970 aa	Predicted RBP	13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	ARL5B	Q96KC2	179 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	KLHL15	Q96M94	604 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	TRIM2	Q9C040	744 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	SLC7A8	Q9UHI5	535 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	A4GNT	Q9UNA3	340 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	SLC9A8	Q9Y2E8	581 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882		V9GYQ6	96 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	MED12	Q93074	2177 aa		13.34	□□□□□ -0.27
NR1H3-222	ENST00000483882	FREM3	P0C091	2139 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	IGKV1D-42	A0A075B6H8	117 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882		A0A1W2PNR3	127 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	MBD3L4	A6NDZ8	208 aa	Predicted RBP	13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	MBD3L3	A6NE82	208 aa	Predicted RBP	13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	MBD3L5	A6NJ08	208 aa	Predicted RBP	13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	CPSF4L	A6NMK7	179 aa	Known RBP	13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	TNFSF11	O14788	317 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	FFAR1	O14842	300 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	PRSS23	O95084	383 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	ATP6V1G2	O95670	118 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	UQCRB	P14927	111 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	OPRM1	P35372	400 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	HTR3A	P46098	478 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	CDH12	P55289	794 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	COPZ1	P61923	177 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	EGR4	Q05215	589 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	DAZAP2	Q15038	168 aa	Predicted RBP	13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	LINC00114	Q6XXX2	140 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	RANBP3L	Q86VV4	465 aa	Predicted RBP	13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	C9orf106	Q8NAJ2	232 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	ZPLD1	Q8TCW7	415 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	ADAMTS16	Q8TE57	1224 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	LZIC	Q8WZA0	190 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	SLC38A4	Q969I6	547 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	DNAJA3	Q96EY1	480 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	POM121	Q96HA1	1249 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	PYURF	Q96I23	114 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	PRSS27	Q9BQR3	290 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	MUC13	Q9H3R2	512 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	TMEM27	Q9HBJ8	222 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	CLCF1	Q9UBD9	225 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	CHRNA9	Q9UGM1	479 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	RPS6KA6	Q9UK32	745 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	POMP	Q9Y244	141 aa		13.33	□□□□□ -0.28
NR1H3-222	ENST00000483882	SETD2	Q9BYW2	2564 aa	Predicted RBP	13.32	□□□□□ -0.28
NR1H3-222	ENST00000483882	CLCA1	A8K7I4	914 aa		13.32	□□□□□ -0.28
NR1H3-222	ENST00000483882		H0Y3Z8	333 aa		13.32	□□□□□ -0.28
NR1H3-222	ENST00000483882	EIF1AY	O14602	144 aa	Known RBP	13.32	□□□□□ -0.28
NR1H3-222	ENST00000483882	CXCL13	O43927	109 aa		13.32	□□□□□ -0.28
NR1H3-222	ENST00000483882	NPIPB7	O75200	414 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms