RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 DCTN4Q9UJW0 460 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 ZNF232Q9UNY5 417 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 IFT52Q9Y366 437 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 FLVCR1Q9Y5Y0 555 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 ZANQ9Y493 2812 aa17.5■□□□□ 0.39
HPS4-213ENST00000483631 A0A096LPI6 279 aa17.49■□□□□ 0.39
HPS4-213ENST00000483631 A0A1W2PP18 115 aa17.49■□□□□ 0.39
HPS4-213ENST00000483631 FAM234BA2RU67 622 aa17.49■□□□□ 0.39
HPS4-213ENST00000483631 PDLIM1O00151 329 aa17.49■□□□□ 0.39
HPS4-213ENST00000483631 GPIP06744 558 aa17.49■□□□□ 0.39
HPS4-213ENST00000483631 SOD3P08294 240 aa17.49■□□□□ 0.39
HPS4-213ENST00000483631 BMP2P12643 396 aa17.49■□□□□ 0.39
HPS4-213ENST00000483631 ETFAP13804 333 aa17.49■□□□□ 0.39
HPS4-213ENST00000483631 CXCR1P25024 350 aa17.49■□□□□ 0.39
HPS4-213ENST00000483631 ACAA2P42765 397 aaKnown RBP17.49■□□□□ 0.39
HPS4-213ENST00000483631 COPZ1P61923 177 aa17.49■□□□□ 0.39
HPS4-213ENST00000483631 SLC17A1Q14916 467 aa17.49■□□□□ 0.39
HPS4-213ENST00000483631 AGBL2Q5U5Z8 902 aa17.49■□□□□ 0.39
HPS4-213ENST00000483631 EPGNQ6UW88 154 aa17.49■□□□□ 0.39
HPS4-213ENST00000483631 ZNF836Q6ZNA1 936 aa17.49■□□□□ 0.39
HPS4-213ENST00000483631 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.49■□□□□ 0.39
HPS4-213ENST00000483631 DTX2Q86UW9 622 aa17.49■□□□□ 0.39
HPS4-213ENST00000483631 CCDC103Q8IW40 242 aa17.49■□□□□ 0.39
HPS4-213ENST00000483631 C17orf78Q8N4C9 275 aa17.49■□□□□ 0.39
HPS4-213ENST00000483631 C1orf162Q8NEQ5 155 aaPredicted RBP17.49■□□□□ 0.39
HPS4-213ENST00000483631 KBTBD8Q8NFY9 601 aa17.49■□□□□ 0.39
HPS4-213ENST00000483631 GTPBP3Q969Y2 492 aaKnown RBP17.49■□□□□ 0.39
HPS4-213ENST00000483631 TMEM45BQ96B21 275 aa17.49■□□□□ 0.39
HPS4-213ENST00000483631 CACYBPQ9HB71 228 aaKnown RBP17.49■□□□□ 0.39
HPS4-213ENST00000483631 BCL2L10Q9HD36 194 aa17.49■□□□□ 0.39
HPS4-213ENST00000483631 USH1CQ9Y6N9 552 aa17.49■□□□□ 0.39
HPS4-213ENST00000483631 CIB4A0PJX0 185 aa17.48■□□□□ 0.39
HPS4-213ENST00000483631 SHISA9B4DS77 424 aa17.48■□□□□ 0.39
HPS4-213ENST00000483631 RAMP1O60894 148 aa17.48■□□□□ 0.39
HPS4-213ENST00000483631 BCHEP06276 602 aa17.48■□□□□ 0.39
HPS4-213ENST00000483631 CCNA2P20248 432 aa17.48■□□□□ 0.39
HPS4-213ENST00000483631 PTAFRP25105 342 aa17.48■□□□□ 0.39
HPS4-213ENST00000483631 NTF4P34130 210 aa17.48■□□□□ 0.39
HPS4-213ENST00000483631 IDUAP35475 653 aa17.48■□□□□ 0.39
HPS4-213ENST00000483631 IRX1P78414 480 aaPredicted RBP17.48■□□□□ 0.39
HPS4-213ENST00000483631 PGGHGQ32M88 737 aa17.48■□□□□ 0.39
HPS4-213ENST00000483631 KLHL17Q6TDP4 642 aa17.48■□□□□ 0.39
HPS4-213ENST00000483631 TMEM108Q6UXF1 575 aa17.48■□□□□ 0.39
HPS4-213ENST00000483631 VRK2Q86Y07 508 aa17.48■□□□□ 0.39
HPS4-213ENST00000483631 GTF2H4Q92759 462 aa17.48■□□□□ 0.39
HPS4-213ENST00000483631 SPATA9Q9BWV2 254 aa17.48■□□□□ 0.39
HPS4-213ENST00000483631 RLIMQ9NVW2 624 aa17.48■□□□□ 0.39
HPS4-213ENST00000483631 TMEM45AQ9NWC5 275 aa17.48■□□□□ 0.39
HPS4-213ENST00000483631 CISD1Q9NZ45 108 aaKnown RBP17.48■□□□□ 0.39
HPS4-213ENST00000483631 NPAP1Q9NZP6 1156 aa17.48■□□□□ 0.39
HPS4-213ENST00000483631 ZNF443Q9Y2A4 671 aaPredicted RBP17.48■□□□□ 0.39
HPS4-213ENST00000483631 SLC25A15Q9Y619 301 aa17.48■□□□□ 0.39
HPS4-213ENST00000483631 JMJD1CQ15652 2540 aa17.47■□□□□ 0.39
HPS4-213ENST00000483631 ZC3H12DA2A288 527 aaKnown RBP17.47■□□□□ 0.39
HPS4-213ENST00000483631 LIPT2A6NK58 231 aa17.47■□□□□ 0.39
HPS4-213ENST00000483631 CCT8L1PA6NM43 557 aa17.47■□□□□ 0.39
HPS4-213ENST00000483631 RAD51DO75771 328 aa17.47■□□□□ 0.39
HPS4-213ENST00000483631 VAMP5O95183 116 aa17.47■□□□□ 0.39
HPS4-213ENST00000483631 TGFBR3Q03167 851 aa17.47■□□□□ 0.39
HPS4-213ENST00000483631 GABRA6Q16445 453 aa17.47■□□□□ 0.39
HPS4-213ENST00000483631 C6orf10Q5SRN2 563 aa17.47■□□□□ 0.39
HPS4-213ENST00000483631 CASP12Q6UXS9 341 aa17.47■□□□□ 0.39
HPS4-213ENST00000483631 Q71RC1 249 aaPredicted RBP17.47■□□□□ 0.39
HPS4-213ENST00000483631 ATG4DQ86TL0 474 aaPredicted RBP17.47■□□□□ 0.39
HPS4-213ENST00000483631 OR9I1Q8NGQ6 314 aa17.47■□□□□ 0.39
HPS4-213ENST00000483631 VPS33AQ96AX1 596 aa17.47■□□□□ 0.39
HPS4-213ENST00000483631 TMEM19Q96HH6 336 aa17.47■□□□□ 0.39
HPS4-213ENST00000483631 BOD1Q96IK1 185 aa17.47■□□□□ 0.39
HPS4-213ENST00000483631 TRAF4Q9BUZ4 470 aaPredicted RBP17.47■□□□□ 0.39
HPS4-213ENST00000483631 MAGED1Q9Y5V3 778 aaPredicted RBP17.47■□□□□ 0.39
HPS4-213ENST00000483631 AQP7P3A6NL99 342 aa17.46■□□□□ 0.39
HPS4-213ENST00000483631 A8MVM7 634 aa17.46■□□□□ 0.39
HPS4-213ENST00000483631 ABCD4O14678 606 aa17.46■□□□□ 0.39
HPS4-213ENST00000483631 IGHV3-9P01782 118 aa17.46■□□□□ 0.39
HPS4-213ENST00000483631 ITGA5P08648 1049 aa17.46■□□□□ 0.39
HPS4-213ENST00000483631 CDH11P55287 796 aa17.46■□□□□ 0.39
HPS4-213ENST00000483631 STX1BP61266 288 aa17.46■□□□□ 0.39
HPS4-213ENST00000483631 FAPQ12884 760 aa17.46■□□□□ 0.39
HPS4-213ENST00000483631 RGNQ15493 299 aa17.46■□□□□ 0.39
HPS4-213ENST00000483631 OTUD3Q5T2D3 398 aaPredicted RBP17.46■□□□□ 0.39
HPS4-213ENST00000483631 NEUROG1Q92886 237 aa17.46■□□□□ 0.39
HPS4-213ENST00000483631 PAIP1Q9H074 479 aaKnown RBP17.46■□□□□ 0.39
HPS4-213ENST00000483631 ALG2Q9H553 416 aa17.46■□□□□ 0.39
HPS4-213ENST00000483631 BARX1Q9HBU1 254 aaPredicted RBP17.46■□□□□ 0.39
HPS4-213ENST00000483631 A4GALTQ9NPC4 353 aa17.46■□□□□ 0.39
HPS4-213ENST00000483631 TCF7L2Q9NQB0 619 aa17.46■□□□□ 0.39
HPS4-213ENST00000483631 UPB1Q9UBR1 384 aa17.46■□□□□ 0.39
HPS4-213ENST00000483631 PCDHB14Q9Y5E9 798 aa17.46■□□□□ 0.39
HPS4-213ENST00000483631 GMEB1Q9Y692 573 aa17.46■□□□□ 0.39
HPS4-213ENST00000483631 CLIC1O00299 241 aa17.45■□□□□ 0.38
HPS4-213ENST00000483631 SMAD7O15105 426 aaKnown RBP17.45■□□□□ 0.38
HPS4-213ENST00000483631 POLR3GO15318 223 aaPredicted RBP17.45■□□□□ 0.38
HPS4-213ENST00000483631 NPIPB7O75200 414 aa17.45■□□□□ 0.38
HPS4-213ENST00000483631 GKN3PP0CG01 181 aa17.45■□□□□ 0.38
HPS4-213ENST00000483631 HOXB9P17482 250 aaPredicted RBP17.45■□□□□ 0.38
HPS4-213ENST00000483631 PAX7P23759 505 aa17.45■□□□□ 0.38
HPS4-213ENST00000483631 CEACAM7Q14002 265 aa17.45■□□□□ 0.38
HPS4-213ENST00000483631 CLEC12BQ2HXU8 276 aa17.45■□□□□ 0.38
HPS4-213ENST00000483631 GTDC1Q4AE62 458 aa17.45■□□□□ 0.38
HPS4-213ENST00000483631 LRIF1Q5T3J3 769 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms