RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 H7C417 338 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 NDUFS8O00217 210 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 UGT2B11O75310 529 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 GCM2O75603 506 aaPredicted RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 REM1O75628 298 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 GAS8-AS1O95177 125 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 CLDN9O95484 217 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 GPR75O95800 540 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 RHOXF2BP0C7M4 288 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 ZSCAN5DPP0CG00 497 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 NAGAP17050 411 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 OGNP20774 298 aaKnown RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 MATN1P21941 496 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 ATP5A1P25705 553 aaKnown RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 DUSP1P28562 367 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 TLX1P31314 330 aaPredicted RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 STIP1P31948 543 aaKnown RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 HPDP32754 393 aaPredicted RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 NAP1L1P55209 391 aaKnown RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 DSCR4P56555 118 aaPredicted RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 RWDD2BP57060 319 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 UBASH3AP57075 661 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 B3GALT5-AS1P59052 145 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 BPIFB3P59826 476 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 HILS1P60008 231 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 RPS3AP61247 264 aaKnown RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 HMGCS1Q01581 520 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 CHRNB3Q05901 458 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 SNTA1Q13424 505 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 THOC5Q13769 683 aaKnown RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 CBFBQ13951 182 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 P2RY6Q15077 328 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 PPA1Q15181 289 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 STK11Q15831 433 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 STX1AQ16623 288 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 KCTD19Q17RG1 926 aaPredicted RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 C18orf21Q32NC0 220 aaPredicted RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 TBRG1Q3YBR2 411 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 RAET1LQ5VY80 246 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 ZNF470Q6ECI4 717 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 DGAT2L7PQ6IED9 249 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 C11orf71Q6IPW1 123 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 ADNP2Q6IQ32 1131 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 FAHD2BQ6P2I3 314 aaPredicted RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 Q6ZSR9 355 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 GPR180Q86V85 440 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 ST13P4Q8IZP2 240 aaPredicted RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 BBOF1Q8ND07 529 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 TTLQ8NG68 377 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 OR4K17Q8NGC6 315 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 OR52B6Q8NGF0 335 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 TAF15Q92804 592 aaKnown RBP eCLIP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 TMCO6Q96DC7 493 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 MUCL1Q96DR8 90 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 OMA1Q96E52 524 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 LINGO1Q96FE5 620 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 FAHD2AQ96GK7 314 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 GMPPAQ96IJ6 420 aaPredicted RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 VPS39Q96JC1 886 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 CCDC42Q96M95 316 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 COG8Q96MW5 612 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 HBEGFQ99075 208 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 NAP1L3Q99457 506 aaPredicted RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 NDNQ99608 321 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 DESI2Q9BSY9 194 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 TBCDQ9BTW9 1192 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 ELOVL1Q9BW60 279 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 C1QTNF6Q9BXI9 259 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 BPESC1Q9GZL8 116 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 ROGDIQ9GZN7 287 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 IL22Q9GZX6 179 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 NXF5Q9H1B4 397 aaKnown RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 CDC42EP4Q9H3Q1 356 aaKnown RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 DSN1Q9H410 356 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 NHEJ1Q9H9Q4 299 aaPredicted RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 GRPEL1Q9HAV7 217 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 INTS10Q9NVR2 710 aaKnown RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 MED11Q9P086 117 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 TBK1Q9UHD2 729 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 BCAP29Q9UHQ4 241 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 TRMT6Q9UJA5 497 aaKnown RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 UTS2RQ9UKP6 389 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 ZNF490Q9ULM2 529 aaPredicted RBP3.08□□□□□ -1.92
LRCH3-217ENST00000483442 TFR2Q9UP52 801 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 ZNF175Q9Y473 711 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 PTGDR2Q9Y5Y4 395 aa3.08□□□□□ -1.92
LRCH3-217ENST00000483442 A0A1W2PR80 420 aa3.07□□□□□ -1.92
LRCH3-217ENST00000483442 OR2M5A3KFT3 312 aa3.07□□□□□ -1.92
LRCH3-217ENST00000483442 C9JVG2 144 aa3.07□□□□□ -1.92
LRCH3-217ENST00000483442 PGRMC2O15173 223 aa3.07□□□□□ -1.92
LRCH3-217ENST00000483442 CXCL13O43927 109 aa3.07□□□□□ -1.92
LRCH3-217ENST00000483442 GMFGO60234 142 aa3.07□□□□□ -1.92
LRCH3-217ENST00000483442 SS18L1O75177 396 aaPredicted RBP3.07□□□□□ -1.92
LRCH3-217ENST00000483442 ZNF189O75820 626 aaPredicted RBP3.07□□□□□ -1.92
LRCH3-217ENST00000483442 LYZL6O75951 148 aa3.07□□□□□ -1.92
LRCH3-217ENST00000483442 SYNGR4O95473 234 aa3.07□□□□□ -1.92
LRCH3-217ENST00000483442 BCL10O95999 233 aa3.07□□□□□ -1.92
LRCH3-217ENST00000483442 GYPCP04921 128 aa3.07□□□□□ -1.92
LRCH3-217ENST00000483442 CT62P0C5K7 136 aa3.07□□□□□ -1.92
LRCH3-217ENST00000483442 SLC35E2BP0CK96 405 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms