RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 CDRT15L2A8MXV6 281 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 TEX22C9J3V5 150 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 MYL12BO14950 172 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 STX11O75558 287 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 SULT1C4O75897 302 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 RAB36O95755 333 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 LCKP06239 509 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 OCM2P0CE71 109 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 OCMP0CE72 109 aaPredicted RBP7.09□□□□□ -1.27
SNX13-208ENST00000482558 SLC35E2P0CK97 266 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 CTSEP14091 401 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 POU2F1P14859 743 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 TMEM11P17152 192 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 GABRG2P18507 467 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 MYL12AP19105 171 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 MAGP20916 626 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 AK4P27144 223 aaPredicted RBP7.09□□□□□ -1.27
SNX13-208ENST00000482558 C21orf33P30042 268 aaPredicted RBP7.09□□□□□ -1.27
SNX13-208ENST00000482558 GSSP48637 474 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 PSMD4P55036 377 aaKnown RBP7.09□□□□□ -1.27
SNX13-208ENST00000482558 MFAP4P55083 255 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 RAB38P57729 211 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 CLDN2P57739 230 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 RGS8P57771 180 aaPredicted RBP7.09□□□□□ -1.27
SNX13-208ENST00000482558 VBP1P61758 197 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 PRKCDQ05655 676 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 MLLT11Q13015 90 aaPredicted RBP7.09□□□□□ -1.27
SNX13-208ENST00000482558 GPR18Q14330 331 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 ZNHIT3Q15649 155 aaPredicted RBP7.09□□□□□ -1.27
SNX13-208ENST00000482558 ZNF181Q2M3W8 571 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 PHF19Q5T6S3 580 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 C18orf63Q68DL7 685 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 LAIR1Q6GTX8 287 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 SLC36A4Q6YBV0 504 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 ZNF730Q6ZMV8 503 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 SEM1Q6ZVN7 128 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 MBOAT2Q6ZWT7 520 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 MED25Q71SY5 747 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 RD3Q7Z3Z2 195 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 IQCHQ86VS3 1027 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 CDK20Q8IZL9 346 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 CARFQ8N187 725 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 SLC44A3Q8N4M1 653 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 MORN4Q8NDC4 146 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 OR5D16Q8NGK9 328 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 OR6T1Q8NGN1 323 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 OR9A2Q8NGT5 310 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 MCFD2Q8NI22 146 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 TMEM163Q8TC26 289 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 FAM3CQ92520 227 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 CORO2AQ92828 525 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 TMCO6Q96DC7 493 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 GIMAP5Q96F15 307 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 HS6ST2Q96MM7 605 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 CCDC3Q9BQI4 270 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 PELOQ9BRX2 385 aaKnown RBP7.09□□□□□ -1.27
SNX13-208ENST00000482558 SLIRPQ9GZT3 109 aaKnown RBP7.09□□□□□ -1.27
SNX13-208ENST00000482558 CHRNA10Q9GZZ6 450 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 GPR35Q9HC97 309 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 FGF20Q9NP95 211 aaPredicted RBP7.09□□□□□ -1.27
SNX13-208ENST00000482558 SLC35D1Q9NTN3 355 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 HRASLS2Q9NWW9 162 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 LRIT1Q9P2V4 623 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 RHCGQ9UBD6 479 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 OSGIN2Q9Y236 505 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 EXOSC1Q9Y3B2 195 aaKnown RBP7.09□□□□□ -1.27
SNX13-208ENST00000482558 ADAM18Q9Y3Q7 739 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 WDR45Q9Y484 360 aa7.09□□□□□ -1.27
SNX13-208ENST00000482558 CCDC88CQ9P219 2028 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 A0A1B0GVG6 124 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 A0A1W2PQM1 296 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 TMEM129A0AVI4 362 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 TRAPPC13A5PLN9 417 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 OR5K3A6NET4 321 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 AGAP5A6NIR3 686 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 FAM90A7PA6NKC0 464 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 ZNF785A8K8V0 405 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 FAM90A22PA8MWA6 464 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 FAM90A12PA8MX19 464 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 FAM90A23PA8MXZ1 464 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 C4orf51C9J302 202 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 LOC110117498-PIK3R3F6TDL0 507 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 H0YGG7 62 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 M0QYG6 137 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 PPM1DO15297 605 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 CHST10O43529 356 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 GALR3O60755 368 aaPredicted RBP7.08□□□□□ -1.28
SNX13-208ENST00000482558 ENTPD6O75354 484 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 SLC43A1O75387 559 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 ACP2P11117 423 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 DBTP11182 482 aaKnown RBP7.08□□□□□ -1.28
SNX13-208ENST00000482558 POLR2CP19387 275 aaPredicted RBP7.08□□□□□ -1.28
SNX13-208ENST00000482558 TNNI3P19429 210 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 CD72P21854 359 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 MMP11P24347 488 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 LIPAP38571 399 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 OPRL1P41146 370 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 ETV6P41212 452 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 CAMLGP49069 296 aa7.08□□□□□ -1.28
SNX13-208ENST00000482558 IL13RA1P78552 427 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms