RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 OR13C5Q8NGS8 318 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 RNASEH2CQ8TDP1 164 aaKnown RBP3.64□□□□□ -1.83
VPS41-212ENST00000482217 ISOC2Q96AB3 205 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 C18orf25Q96B23 403 aaPredicted RBP3.64□□□□□ -1.83
VPS41-212ENST00000482217 APH1AQ96BI3 265 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 CCDC42Q96M95 316 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 ZFP3Q96NJ6 502 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 GFM1Q96RP9 751 aaKnown RBP3.64□□□□□ -1.83
VPS41-212ENST00000482217 ATF6BQ99941 703 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 HOPXQ9BPY8 73 aaPredicted RBP3.64□□□□□ -1.83
VPS41-212ENST00000482217 PSD2Q9BQI7 771 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 NEURL2Q9BR09 285 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 TIMM29Q9BSF4 260 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 DCUN1D5Q9BTE7 237 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 PRRG4Q9BZD6 226 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 TMEM39BQ9GZU3 492 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 LHPPQ9H008 270 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 MMP28Q9H239 520 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 OR51M1Q9H341 326 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 KIR3DX1Q9H7L2 352 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 GPN2Q9H9Y4 310 aaPredicted RBP3.64□□□□□ -1.83
VPS41-212ENST00000482217 HRASLSQ9HDD0 168 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 SLC17A5Q9NRA2 495 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 EXD2Q9NVH0 621 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 RMND1Q9NWS8 449 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 ELOVL5Q9NYP7 299 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 SIGLEC8Q9NYZ4 499 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 TECRQ9NZ01 308 aaKnown RBP3.64□□□□□ -1.83
VPS41-212ENST00000482217 USE1Q9NZ43 259 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 IL36GQ9NZH8 169 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 B3GAT1Q9P2W7 334 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 OPN4Q9UHM6 478 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 MRTO4Q9UKD2 239 aaKnown RBP3.64□□□□□ -1.83
VPS41-212ENST00000482217 DHRS7Q9Y394 339 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 POLR3HQ9Y535 204 aaPredicted RBP3.64□□□□□ -1.83
VPS41-212ENST00000482217 TTC3P53804 2025 aa3.64□□□□□ -1.83
VPS41-212ENST00000482217 COL3A1P02461 1466 aaPredicted RBP3.64□□□□□ -1.83
VPS41-212ENST00000482217 A0A0J9YVX5 310 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 ATP6AP2A0A1C7CYW4 349 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 HYKKA2RU49 373 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 C2orf74A8MZ97 194 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 LMO7DNF2Z398 122 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 CLDN34H7C241 214 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 hCG_2039718K7EN88 272 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 M0R3G1 203 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 PDHXO00330 501 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 LAD1O00515 517 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 DYNC1I1O14576 645 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 OR7A17O14581 309 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 TNFSF11O14788 317 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 MSH4O15457 936 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 CTNSO60931 367 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 PRKRAO75569 313 aaKnown RBP3.63□□□□□ -1.83
VPS41-212ENST00000482217 CEACAM4O75871 244 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 STK17BO94768 372 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 OXSR1O95747 527 aaPredicted RBP3.63□□□□□ -1.83
VPS41-212ENST00000482217 CA1P00915 261 aaPredicted RBP3.63□□□□□ -1.83
VPS41-212ENST00000482217 ALDOBP05062 364 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 DCNP07585 359 aaKnown RBP3.63□□□□□ -1.83
VPS41-212ENST00000482217 APRTP07741 180 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 MELTFP08582 738 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 HBQ1P09105 142 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 PET100P0DJ07 73 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 TFPIP10646 304 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 HSPD1P10809 573 aaKnown RBP3.63□□□□□ -1.83
VPS41-212ENST00000482217 MYL2P10916 166 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 ARSBP15848 533 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 PSMC3P17980 439 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 TNFRSF1BP20333 461 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 GNLYP22749 145 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 LHCGRP22888 699 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 CXCR2P25025 360 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 HMGB2P26583 209 aaKnown RBP3.63□□□□□ -1.83
VPS41-212ENST00000482217 MPIP34949 423 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 RBM34P42696 430 aaKnown RBP3.63□□□□□ -1.83
VPS41-212ENST00000482217 GYG1P46976 350 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 EFNB2P52799 333 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 MAZP56270 477 aaKnown RBP3.63□□□□□ -1.83
VPS41-212ENST00000482217 ZP1P60852 638 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 RAB10P61026 200 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 MAGOHP61326 146 aaKnown RBP3.63□□□□□ -1.83
VPS41-212ENST00000482217 KCNJ2P63252 427 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 ST3GAL1Q11201 340 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 ZNHIT3Q15649 155 aaPredicted RBP3.63□□□□□ -1.83
VPS41-212ENST00000482217 CHRFAM7AQ494W8 412 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 PHLDA2Q53GA4 152 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 ARMCX4Q5H9R4 360 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 BRMS1LQ5PSV4 323 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 HACD4Q5VWC8 232 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 METTL21CQ5VZV1 264 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 ZNF776Q68DI1 518 aaPredicted RBP3.63□□□□□ -1.83
VPS41-212ENST00000482217 CDC42EP5Q6NZY7 148 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 PNCKQ6P2M8 343 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 FUT10Q6P4F1 479 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 SLC25A47Q6Q0C1 308 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 TMPRSS11AQ6ZMR5 421 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 FAM92BQ6ZTR7 304 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 LINC00336Q6ZUF6 198 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 Q7L0L9 218 aa3.63□□□□□ -1.83
VPS41-212ENST00000482217 SLC16A14Q7RTX9 510 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms