RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 WNT9BO14905 357 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 SDC1P18827 310 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 FPR2P25090 351 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 CCT3P49368 545 aaKnown RBP12.88□□□□□ -0.35
HDAC6-224ENST00000481929 LMO4P61968 165 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 KIAA0040Q15053 153 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 GPR68Q15743 365 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 ZNF141Q15928 474 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 SPDYE7PQ495Y7 208 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 ZNF311Q5JNZ3 666 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 EIF3MQ7L2H7 374 aaKnown RBP12.88□□□□□ -0.35
HDAC6-224ENST00000481929 GRINAQ7Z429 371 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 FAM169BQ8N8A8 192 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 OR4M2Q8NGB6 313 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 DCAKDQ8WVC6 231 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 RDH5Q92781 318 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 BCL2L2Q92843 193 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-224ENST00000481929 NAPGQ99747 312 aaPredicted RBP12.88□□□□□ -0.35
HDAC6-224ENST00000481929 TMPRSS13Q9BYE2 586 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 GSTO2Q9H4Y5 243 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 C1orf109Q9NX04 203 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 TMEM216Q9P0N5 145 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 CMAHPQ9Y471 501 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 CORINQ9Y5Q5 1042 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 IGHV2OR16-5A0A0B4J2B6 119 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 M0R233 179 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 PIP5K1BO14986 540 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 PPIHO43447 177 aaKnown RBP12.87□□□□□ -0.35
HDAC6-224ENST00000481929 SYNGR3O43761 229 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 URI1O94763 535 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-224ENST00000481929 IGKV3-15P01624 115 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 ADRA2CP18825 462 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 CCNA2P20248 432 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 COL8A2P25067 703 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 TMEM33P57088 247 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 SNTB2Q13425 540 aaKnown RBP12.87□□□□□ -0.35
HDAC6-224ENST00000481929 OCLNQ16625 522 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 REP15Q6BDI9 236 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 ACSM5Q6NUN0 579 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 RBMS3Q6XE24 437 aaKnown RBP12.87□□□□□ -0.35
HDAC6-224ENST00000481929 R3HCC1LQ7Z5L2 792 aaKnown RBP12.87□□□□□ -0.35
HDAC6-224ENST00000481929 CCNYL1Q8N7R7 359 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 MAGEE2Q8TD90 523 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-224ENST00000481929 MTERF3Q96E29 417 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 ALKBH3Q96Q83 286 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-224ENST00000481929 SDF2Q99470 211 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 MS4A5Q9H3V2 200 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 ZNF275Q9NSD4 429 aaPredicted RBP12.87□□□□□ -0.35
HDAC6-224ENST00000481929 GPATCH2Q9NW75 528 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 NINJ2Q9NZG7 142 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 REV1Q9UBZ9 1251 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 PCDHGB4Q9UN71 923 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 CCL27Q9Y4X3 112 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 NBEAL2Q6ZNJ1 2754 aa12.87□□□□□ -0.35
HDAC6-224ENST00000481929 A0A096LPE4 126 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 CENPVL1A0A0U1RR11 272 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 A0A1W2PPZ6 126 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 POM121CA8CG34 1229 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 H3BQF6 201 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 J3QLI3 93 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 PRSS23O95084 383 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 HPXP02790 462 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 GSTA1P08263 222 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 CELA3BP08861 270 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 PRPH2P23942 346 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 RYKP34925 604 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 IL13RA1P78552 427 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 DAG1Q14118 895 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 OTUD3Q5T2D3 398 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-224ENST00000481929 PAQR6Q6TCH4 344 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 MYPOPQ86VE0 399 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-224ENST00000481929 ADGRG3Q86Y34 549 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 RIBC1Q8N443 379 aaPredicted RBP12.86□□□□□ -0.35
HDAC6-224ENST00000481929 ZIC4Q8N9L1 334 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 SPATA4Q8NEY3 305 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 OR9K2Q8NGE7 335 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 C22orf15Q8WYQ4 148 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 DDIT4LQ96D03 193 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 ZNF385AQ96PM9 386 aaKnown RBP12.86□□□□□ -0.35
HDAC6-224ENST00000481929 OR7D2Q96RA2 312 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 BAIAP2L1Q9UHR4 511 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 KCNE5Q9UJ90 142 aa12.86□□□□□ -0.35
HDAC6-224ENST00000481929 CMYA5Q8N3K9 4069 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 STX11O75558 287 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 UGT2B17O75795 530 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 MPZL1O95297 269 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 IMPDH2P12268 514 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 HOXB1P14653 301 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-224ENST00000481929 CBR1P16152 277 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 TCN1P20061 433 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-224ENST00000481929 EVX1P49640 407 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 GNG11P61952 73 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 C2orf54Q08AI8 447 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 ZP4Q12836 540 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 KRT80Q6KB66 452 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 FAM71CQ8NEG0 241 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 OR5D16Q8NGK9 328 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 RNF217Q8TC41 542 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 PMM1Q92871 262 aa12.85□□□□□ -0.35
HDAC6-224ENST00000481929 FCRL1Q96LA6 429 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms