RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 ASB6Q9NWX5 421 aa16.33■□□□□ 0.2
CLK1-211ENST00000481641 P2RX2Q9UBL9 471 aa16.33■□□□□ 0.2
CLK1-211ENST00000481641 GDF2Q9UK05 429 aaPredicted RBP16.33■□□□□ 0.2
CLK1-211ENST00000481641 FLVCR1Q9Y5Y0 555 aa16.33■□□□□ 0.2
CLK1-211ENST00000481641 SLC25A15Q9Y619 301 aa16.33■□□□□ 0.2
CLK1-211ENST00000481641 CDHR4A6H8M9 788 aa16.32■□□□□ 0.2
CLK1-211ENST00000481641 UBDO15205 165 aa16.32■□□□□ 0.2
CLK1-211ENST00000481641 IGHV4-39P01824 125 aa16.32■□□□□ 0.2
CLK1-211ENST00000481641 TFPTP0C1Z6 253 aa16.32■□□□□ 0.2
CLK1-211ENST00000481641 PRG2P13727 222 aa16.32■□□□□ 0.2
CLK1-211ENST00000481641 POLR2JP52435 117 aaKnown RBP16.32■□□□□ 0.2
CLK1-211ENST00000481641 SLC18A1P54219 525 aa16.32■□□□□ 0.2
CLK1-211ENST00000481641 DSTNP60981 165 aa16.32■□□□□ 0.2
CLK1-211ENST00000481641 CEACAM7Q14002 265 aa16.32■□□□□ 0.2
CLK1-211ENST00000481641 SLC17A1Q14916 467 aa16.32■□□□□ 0.2
CLK1-211ENST00000481641 GABRA6Q16445 453 aa16.32■□□□□ 0.2
CLK1-211ENST00000481641 CADM2Q8N3J6 435 aa16.32■□□□□ 0.2
CLK1-211ENST00000481641 TMEM99Q8N816 258 aa16.32■□□□□ 0.2
CLK1-211ENST00000481641 SLC38A5Q8WUX1 472 aa16.32■□□□□ 0.2
CLK1-211ENST00000481641 PMM1Q92871 262 aa16.32■□□□□ 0.2
CLK1-211ENST00000481641 NAA11Q9BSU3 229 aaPredicted RBP16.32■□□□□ 0.2
CLK1-211ENST00000481641 SLCO5A1Q9H2Y9 848 aa16.32■□□□□ 0.2
CLK1-211ENST00000481641 SDR39U1Q9NRG7 319 aaPredicted RBP16.32■□□□□ 0.2
CLK1-211ENST00000481641 SLC7A10Q9NS82 523 aa16.32■□□□□ 0.2
CLK1-211ENST00000481641 TAS2R16Q9NYV7 291 aa16.32■□□□□ 0.2
CLK1-211ENST00000481641 ZIM2Q9NZV7 527 aa16.32■□□□□ 0.2
CLK1-211ENST00000481641 DSPPQ9NZW4 1301 aa16.32■□□□□ 0.2
CLK1-211ENST00000481641 MALT1Q9UDY8 824 aa16.32■□□□□ 0.2
CLK1-211ENST00000481641 ZNF443Q9Y2A4 671 aaPredicted RBP16.32■□□□□ 0.2
CLK1-211ENST00000481641 CHST2Q9Y4C5 530 aa16.32■□□□□ 0.2
CLK1-211ENST00000481641 ANK3Q12955 4377 aaKnown RBP16.31■□□□□ 0.2
CLK1-211ENST00000481641 EIF1BO60739 113 aaKnown RBP16.31■□□□□ 0.2
CLK1-211ENST00000481641 AKR7A3O95154 331 aa16.31■□□□□ 0.2
CLK1-211ENST00000481641 NUDT7P0C024 238 aa16.31■□□□□ 0.2
CLK1-211ENST00000481641 ZCCHC18P0CG32 403 aa16.31■□□□□ 0.2
CLK1-211ENST00000481641 UQCRBP14927 111 aa16.31■□□□□ 0.2
CLK1-211ENST00000481641 CXCR1P25024 350 aa16.31■□□□□ 0.2
CLK1-211ENST00000481641 IDUAP35475 653 aa16.31■□□□□ 0.2
CLK1-211ENST00000481641 KRTAP1-1Q07627 177 aa16.31■□□□□ 0.2
CLK1-211ENST00000481641 OR7A5Q15622 319 aa16.31■□□□□ 0.2
CLK1-211ENST00000481641 GSTA3Q16772 222 aa16.31■□□□□ 0.2
CLK1-211ENST00000481641 LIN52Q52LA3 116 aa16.31■□□□□ 0.2
CLK1-211ENST00000481641 C6orf10Q5SRN2 563 aa16.31■□□□□ 0.2
CLK1-211ENST00000481641 OTUD3Q5T2D3 398 aaPredicted RBP16.31■□□□□ 0.2
CLK1-211ENST00000481641 TSPO2Q5TGU0 170 aa16.31■□□□□ 0.2
CLK1-211ENST00000481641 WDR31Q8NA23 367 aa16.31■□□□□ 0.2
CLK1-211ENST00000481641 TMEM19Q96HH6 336 aa16.31■□□□□ 0.2
CLK1-211ENST00000481641 ITCHQ96J02 903 aa16.31■□□□□ 0.2
CLK1-211ENST00000481641 MUS81Q96NY9 551 aa16.31■□□□□ 0.2
CLK1-211ENST00000481641 ALG2Q9H553 416 aa16.31■□□□□ 0.2
CLK1-211ENST00000481641 UPB1Q9UBR1 384 aa16.31■□□□□ 0.2
CLK1-211ENST00000481641 HEATR1Q9H583 2144 aaKnown RBP16.31■□□□□ 0.2
CLK1-211ENST00000481641 CR1P17927 2039 aa16.3■□□□□ 0.2
CLK1-211ENST00000481641 LIPT2A6NK58 231 aa16.3■□□□□ 0.2
CLK1-211ENST00000481641 E7EQL1 145 aa16.3■□□□□ 0.2
CLK1-211ENST00000481641 M0R1B8 84 aa16.3■□□□□ 0.2
CLK1-211ENST00000481641 PDLIM1O00151 329 aa16.3■□□□□ 0.2
CLK1-211ENST00000481641 THBS1P07996 1170 aa16.3■□□□□ 0.2
CLK1-211ENST00000481641 CRISP3P54108 245 aa16.3■□□□□ 0.2
CLK1-211ENST00000481641 BEND6Q5SZJ8 279 aaPredicted RBP16.3■□□□□ 0.2
CLK1-211ENST00000481641 SLC2A7Q6PXP3 512 aa16.3■□□□□ 0.2
CLK1-211ENST00000481641 PAQR6Q6TCH4 344 aa16.3■□□□□ 0.2
CLK1-211ENST00000481641 B3GLCTQ6Y288 498 aa16.3■□□□□ 0.2
CLK1-211ENST00000481641 DTX2Q86UW9 622 aa16.3■□□□□ 0.2
CLK1-211ENST00000481641 ZNF440Q8IYI8 595 aa16.3■□□□□ 0.2
CLK1-211ENST00000481641 ZIC4Q8N9L1 334 aa16.3■□□□□ 0.2
CLK1-211ENST00000481641 ZNF385AQ96PM9 386 aaKnown RBP16.3■□□□□ 0.2
CLK1-211ENST00000481641 REG4Q9BYZ8 158 aa16.3■□□□□ 0.2
CLK1-211ENST00000481641 RMND5AQ9H871 391 aa16.3■□□□□ 0.2
CLK1-211ENST00000481641 CALML5Q9NZT1 146 aa16.3■□□□□ 0.2
CLK1-211ENST00000481641 B3GALT5Q9Y2C3 310 aa16.3■□□□□ 0.2
CLK1-211ENST00000481641 SLC9A8Q9Y2E8 581 aa16.3■□□□□ 0.2
CLK1-211ENST00000481641 PCDHB14Q9Y5E9 798 aa16.3■□□□□ 0.2
CLK1-211ENST00000481641 USH1CQ9Y6N9 552 aa16.3■□□□□ 0.2
CLK1-211ENST00000481641 SONP18583 2426 aaKnown RBP16.29■□□□□ 0.2
CLK1-211ENST00000481641 KIAA1324LA8MWY0 1029 aaPredicted RBP16.29■□□□□ 0.2
CLK1-211ENST00000481641 FRS3O43559 492 aa16.29■□□□□ 0.2
CLK1-211ENST00000481641 CD40P25942 277 aa16.29■□□□□ 0.2
CLK1-211ENST00000481641 PPP2R2BQ00005 443 aa16.29■□□□□ 0.2
CLK1-211ENST00000481641 SLC25A3Q00325 362 aa16.29■□□□□ 0.2
CLK1-211ENST00000481641 HOXC5Q00444 222 aa16.29■□□□□ 0.2
CLK1-211ENST00000481641 SLC22A25Q6T423 547 aa16.29■□□□□ 0.2
CLK1-211ENST00000481641 TMEM108Q6UXF1 575 aa16.29■□□□□ 0.2
CLK1-211ENST00000481641 SERPINA11Q86U17 422 aa16.29■□□□□ 0.2
CLK1-211ENST00000481641 MIER2Q8N344 545 aa16.29■□□□□ 0.2
CLK1-211ENST00000481641 GTF2H4Q92759 462 aa16.29■□□□□ 0.2
CLK1-211ENST00000481641 MAL2Q969L2 176 aa16.29■□□□□ 0.2
CLK1-211ENST00000481641 PAIP1Q9H074 479 aaKnown RBP16.29■□□□□ 0.2
CLK1-211ENST00000481641 PARPBPQ9NWS1 579 aa16.29■□□□□ 0.2
CLK1-211ENST00000481641 ADPRHL2Q9NX46 363 aa16.29■□□□□ 0.2
CLK1-211ENST00000481641 POU2F3Q9UKI9 436 aa16.29■□□□□ 0.2
CLK1-211ENST00000481641 ABCA1O95477 2261 aa16.28■□□□□ 0.2
CLK1-211ENST00000481641 FAM234BA2RU67 622 aa16.28■□□□□ 0.2
CLK1-211ENST00000481641 GPIP06744 558 aa16.28■□□□□ 0.2
CLK1-211ENST00000481641 CDH2P19022 906 aaPredicted RBP16.28■□□□□ 0.2
CLK1-211ENST00000481641 NCF2P19878 526 aaPredicted RBP16.28■□□□□ 0.2
CLK1-211ENST00000481641 COPZ1P61923 177 aa16.28■□□□□ 0.2
CLK1-211ENST00000481641 LGALS3BPQ08380 585 aa16.28■□□□□ 0.2
CLK1-211ENST00000481641 LARS2Q15031 903 aaKnown RBP16.28■□□□□ 0.2
CLK1-211ENST00000481641 RNF220Q5VTB9 566 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms