RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 TMEM27Q9HBJ8 222 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 PROK2Q9HC23 129 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 C8orf4Q9NR00 106 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 GPR83Q9NYM4 423 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 USE1Q9NZ43 259 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 PDP1Q9P0J1 537 aaPredicted RBP6.04□□□□□ -1.44
USP48-208ENST00000479177 ABI3Q9P2A4 366 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 PFDN2Q9UHV9 154 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 SLC7A7Q9UM01 511 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 USP24Q9UPU5 2620 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 ZFHX4Q86UP3 3567 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 RP1L1Q8IWN7 2480 aaPredicted RBP6.03□□□□□ -1.44
USP48-208ENST00000479177 SH3PXD2BA1X283 911 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 H0YJX3 145 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 DLGAP1O14490 977 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 CHP2O43745 196 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 PIP5K1CO60331 668 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 CEACAM4O75871 244 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 NEURL1O76050 574 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 CCNB2O95067 398 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 WDPCPO95876 746 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 LINGO3P0C6S8 592 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 PI3P19957 117 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 PGCP20142 388 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 PRKACGP22612 351 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 IFNA8P32881 189 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 CASRP41180 1078 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 CYB561P49447 251 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 P2RX1P51575 399 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 DLX5P56178 289 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 COPZ1P61923 177 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 C17orf67Q0P5P2 114 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 RAPSNQ13702 412 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 QPRTQ15274 297 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 MICAQ29983 383 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 DEFB109BQ30KR1 87 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 DCST1Q5T197 706 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 AGAP7PQ5VUJ5 663 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 SLC22A10Q63ZE4 541 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 WBP2NLQ6ICG8 309 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 ISLR2Q6UXK2 745 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 LINC00696Q6ZRV3 163 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 MDGA2Q7Z553 956 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 NKAIN4Q8IVV8 208 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 APLFQ8IW19 511 aaPredicted RBP6.03□□□□□ -1.44
USP48-208ENST00000479177 CADM2Q8N3J6 435 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 GALNT4Q8N4A0 578 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 FADS6Q8N9I5 356 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 PSD4Q8NDX1 1056 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 OR2M3Q8NG83 312 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 OR4K5Q8NGD3 323 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 OR9Q2Q8NGE9 314 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 GPR119Q8TDV5 335 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 GIPC3Q8TF64 312 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 DUSP19Q8WTR2 217 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 TMEM255BQ8WV15 326 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 DNAJA4Q8WW22 397 aaPredicted RBP6.03□□□□□ -1.44
USP48-208ENST00000479177 ACOT11Q8WXI4 607 aaPredicted RBP6.03□□□□□ -1.44
USP48-208ENST00000479177 RELTQ969Z4 430 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 TMEM41AQ96HV5 264 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 ZNF597Q96LX8 424 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 AGAP4Q96P64 663 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 ZNF184Q99676 751 aaPredicted RBP6.03□□□□□ -1.44
USP48-208ENST00000479177 RBM4BQ9BQ04 359 aaKnown RBP6.03□□□□□ -1.44
USP48-208ENST00000479177 PRSS27Q9BQR3 290 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 UTP23Q9BRU9 249 aaKnown RBP6.03□□□□□ -1.44
USP48-208ENST00000479177 ZNF426Q9BUY5 554 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 RBM4Q9BWF3 364 aaKnown RBP6.03□□□□□ -1.44
USP48-208ENST00000479177 OSBPL10Q9BXB5 764 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 SMURF2Q9HAU4 748 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 HHATLQ9HCP6 504 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 SACM1LQ9NTJ5 587 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 ANKRD10Q9NXR5 420 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 CNIH4Q9P003 139 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 PPP4R1LQ9P1A2 415 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 KIF17Q9P2E2 1029 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 RPS6KB2Q9UBS0 482 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 TMCC3Q9ULS5 477 aa6.03□□□□□ -1.44
USP48-208ENST00000479177 LOC400499M0QZD8 3231 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 EPG5Q9HCE0 2579 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 IGKV1D-42A0A075B6H8 117 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 A0A087WUU8 490 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 OR5H15A6NDH6 313 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 LRRC3CA6NJW4 275 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 A6NL46 340 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 C22orf46C9J442 243 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 G3V3Y1 287 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 PRODHO43272 600 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 GMFGO60234 142 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 CDC40O60508 579 aaKnown RBP eCLIP6.02□□□□□ -1.45
USP48-208ENST00000479177 MITFO75030 526 aaPredicted RBP6.02□□□□□ -1.45
USP48-208ENST00000479177 TRIM3O75382 744 aaPredicted RBP6.02□□□□□ -1.45
USP48-208ENST00000479177 SLC25A12O75746 678 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 SNX4O95219 450 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 F10P00742 488 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 ADAP00813 363 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 P04436 131 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 GP1BBP13224 206 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 ANXA8P13928 327 aa6.02□□□□□ -1.45
USP48-208ENST00000479177 IGFBP5P24593 272 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms