RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 BHLHA15Q7RTS1 189 aaPredicted RBP20.7■□□□□ 0.9
C9orf3-215ENST00000478473 SERPINA11Q86U17 422 aa20.7■□□□□ 0.9
C9orf3-215ENST00000478473 WFDC8Q8IUA0 241 aa20.7■□□□□ 0.9
C9orf3-215ENST00000478473 ZNF100Q8IYN0 542 aa20.7■□□□□ 0.9
C9orf3-215ENST00000478473 LSMEM1Q8N8F7 131 aa20.7■□□□□ 0.9
C9orf3-215ENST00000478473 C3orf49Q96BT1 292 aa20.7■□□□□ 0.9
C9orf3-215ENST00000478473 ZNF775Q96BV0 537 aaPredicted RBP20.7■□□□□ 0.9
C9orf3-215ENST00000478473 NAA11Q9BSU3 229 aaPredicted RBP20.7■□□□□ 0.9
C9orf3-215ENST00000478473 SF3B5Q9BWJ5 86 aaKnown RBP20.7■□□□□ 0.9
C9orf3-215ENST00000478473 C12orf10Q9HB07 376 aa20.7■□□□□ 0.9
C9orf3-215ENST00000478473 CACYBPQ9HB71 228 aaKnown RBP20.7■□□□□ 0.9
C9orf3-215ENST00000478473 NGBQ9NPG2 151 aa20.7■□□□□ 0.9
C9orf3-215ENST00000478473 TRIM33Q9UPN9 1127 aa20.7■□□□□ 0.9
C9orf3-215ENST00000478473 FLVCR1Q9Y5Y0 555 aa20.7■□□□□ 0.9
C9orf3-215ENST00000478473 A8MVM7 634 aa20.69■□□□□ 0.9
C9orf3-215ENST00000478473 PDLIM1O00151 329 aa20.69■□□□□ 0.9
C9orf3-215ENST00000478473 GPIP06744 558 aa20.69■□□□□ 0.9
C9orf3-215ENST00000478473 PAX1P15863 534 aa20.69■□□□□ 0.9
C9orf3-215ENST00000478473 IDUAP35475 653 aa20.69■□□□□ 0.9
C9orf3-215ENST00000478473 CDK6Q00534 326 aa20.69■□□□□ 0.9
C9orf3-215ENST00000478473 FOXD4Q12950 439 aaPredicted RBP20.69■□□□□ 0.9
C9orf3-215ENST00000478473 ADRM1Q16186 407 aa20.69■□□□□ 0.9
C9orf3-215ENST00000478473 RUNDC3AQ59EK9 446 aa20.69■□□□□ 0.9
C9orf3-215ENST00000478473 TIMM23BQ5SRD1 257 aa20.69■□□□□ 0.9
C9orf3-215ENST00000478473 NCMAPQ5T1S8 102 aa20.69■□□□□ 0.9
C9orf3-215ENST00000478473 SHEQ5VZ18 495 aa20.69■□□□□ 0.9
C9orf3-215ENST00000478473 DHRS4L2Q6PKH6 230 aa20.69■□□□□ 0.9
C9orf3-215ENST00000478473 ATG4DQ86TL0 474 aaPredicted RBP20.69■□□□□ 0.9
C9orf3-215ENST00000478473 ZNF433Q8N7K0 673 aaPredicted RBP20.69■□□□□ 0.9
C9orf3-215ENST00000478473 ZNF611Q8N823 705 aa20.69■□□□□ 0.9
C9orf3-215ENST00000478473 STK35Q8TDR2 534 aa20.69■□□□□ 0.9
C9orf3-215ENST00000478473 TMEM45BQ96B21 275 aa20.69■□□□□ 0.9
C9orf3-215ENST00000478473 APH1AQ96BI3 265 aa20.69■□□□□ 0.9
C9orf3-215ENST00000478473 CPPED1Q9BRF8 314 aaPredicted RBP20.69■□□□□ 0.9
C9orf3-215ENST00000478473 FLNAP21333 2647 aaKnown RBP20.69■□□□□ 0.9
C9orf3-215ENST00000478473 C5orf58C9J3I9 102 aa20.68■□□□□ 0.9
C9orf3-215ENST00000478473 RIPPLY3P57055 190 aa20.68■□□□□ 0.9
C9orf3-215ENST00000478473 PRSS57Q6UWY2 283 aa20.68■□□□□ 0.9
C9orf3-215ENST00000478473 UBTD1Q9HAC8 227 aa20.68■□□□□ 0.9
C9orf3-215ENST00000478473 PARPBPQ9NWS1 579 aa20.68■□□□□ 0.9
C9orf3-215ENST00000478473 LEF1Q9UJU2 399 aaPredicted RBP20.68■□□□□ 0.9
C9orf3-215ENST00000478473 SLC9A8Q9Y2E8 581 aa20.68■□□□□ 0.9
C9orf3-215ENST00000478473 ARID1AO14497 2285 aa20.67■□□□□ 0.9
C9orf3-215ENST00000478473 DSCAMO60469 2012 aa20.67■□□□□ 0.9
C9orf3-215ENST00000478473 AQP7P3A6NL99 342 aa20.67■□□□□ 0.9
C9orf3-215ENST00000478473 EVPLLA8MZ36 301 aa20.67■□□□□ 0.9
C9orf3-215ENST00000478473 MRPL33O75394 65 aaKnown RBP20.67■□□□□ 0.9
C9orf3-215ENST00000478473 LYZL6O75951 148 aa20.67■□□□□ 0.9
C9orf3-215ENST00000478473 PLAUP00749 431 aa20.67■□□□□ 0.9
C9orf3-215ENST00000478473 P2RY4P51582 365 aa20.67■□□□□ 0.9
C9orf3-215ENST00000478473 C1QTNF12Q5T7M4 302 aa20.67■□□□□ 0.9
C9orf3-215ENST00000478473 KRT73Q86Y46 540 aa20.67■□□□□ 0.9
C9orf3-215ENST00000478473 CADM2Q8N3J6 435 aa20.67■□□□□ 0.9
C9orf3-215ENST00000478473 WFDC11Q8NEX6 87 aa20.67■□□□□ 0.9
C9orf3-215ENST00000478473 NFKBIDQ8NI38 313 aa20.67■□□□□ 0.9
C9orf3-215ENST00000478473 SPATA5L1Q9BVQ7 753 aa20.67■□□□□ 0.9
C9orf3-215ENST00000478473 AMBRA1Q9C0C7 1298 aa20.67■□□□□ 0.9
C9orf3-215ENST00000478473 NPHS2Q9NP85 383 aa20.67■□□□□ 0.9
C9orf3-215ENST00000478473 DCTN4Q9UJW0 460 aa20.67■□□□□ 0.9
C9orf3-215ENST00000478473 NDUFAF1Q9Y375 327 aa20.67■□□□□ 0.9
C9orf3-215ENST00000478473 SETD2Q9BYW2 2564 aaPredicted RBP20.67■□□□□ 0.9
C9orf3-215ENST00000478473 VPS13CQ709C8 3753 aa20.66■□□□□ 0.9
C9orf3-215ENST00000478473 C2CD3Q4AC94 2353 aa20.66■□□□□ 0.9
C9orf3-215ENST00000478473 OR5H1A6NKK0 313 aa20.66■□□□□ 0.9
C9orf3-215ENST00000478473 FTCDNL1E5RQL4 147 aa20.66■□□□□ 0.9
C9orf3-215ENST00000478473 HS3ST1O14792 307 aa20.66■□□□□ 0.9
C9orf3-215ENST00000478473 FRS3O43559 492 aa20.66■□□□□ 0.9
C9orf3-215ENST00000478473 GGT1P19440 569 aa20.66■□□□□ 0.9
C9orf3-215ENST00000478473 NKX6-1P78426 367 aaPredicted RBP20.66■□□□□ 0.9
C9orf3-215ENST00000478473 CEACAM7Q14002 265 aa20.66■□□□□ 0.9
C9orf3-215ENST00000478473 RETREG3Q86VR2 466 aa20.66■□□□□ 0.9
C9orf3-215ENST00000478473 ZIC4Q8N9L1 334 aa20.66■□□□□ 0.9
C9orf3-215ENST00000478473 BHLHE22Q8NFJ8 381 aaPredicted RBP20.66■□□□□ 0.9
C9orf3-215ENST00000478473 LILRB1Q8NHL6 650 aaPredicted RBP20.66■□□□□ 0.9
C9orf3-215ENST00000478473 DNAJA3Q96EY1 480 aa20.66■□□□□ 0.9
C9orf3-215ENST00000478473 BOD1Q96IK1 185 aa20.66■□□□□ 0.9
C9orf3-215ENST00000478473 ANKRD27Q96NW4 1050 aa20.66■□□□□ 0.9
C9orf3-215ENST00000478473 MUS81Q96NY9 551 aa20.66■□□□□ 0.9
C9orf3-215ENST00000478473 CCL19Q99731 98 aa20.66■□□□□ 0.9
C9orf3-215ENST00000478473 GSX2Q9BZM3 304 aa20.66■□□□□ 0.9
C9orf3-215ENST00000478473 ESRP2Q9H6T0 727 aaKnown RBP20.66■□□□□ 0.9
C9orf3-215ENST00000478473 EVA1AQ9H8M9 152 aa20.66■□□□□ 0.9
C9orf3-215ENST00000478473 TAS2R16Q9NYV7 291 aa20.66■□□□□ 0.9
C9orf3-215ENST00000478473 SMPD2O60906 423 aa20.65■□□□□ 0.9
C9orf3-215ENST00000478473 VAMP5O95183 116 aa20.65■□□□□ 0.9
C9orf3-215ENST00000478473 NCF2P19878 526 aaPredicted RBP20.65■□□□□ 0.9
C9orf3-215ENST00000478473 PCBP3P57721 371 aaKnown RBP20.65■□□□□ 0.9
C9orf3-215ENST00000478473 EGR4Q05215 589 aa20.65■□□□□ 0.9
C9orf3-215ENST00000478473 RBBP4Q09028 425 aa20.65■□□□□ 0.9
C9orf3-215ENST00000478473 SCARB2Q14108 478 aa20.65■□□□□ 0.9
C9orf3-215ENST00000478473 OTUD3Q5T2D3 398 aaPredicted RBP20.65■□□□□ 0.9
C9orf3-215ENST00000478473 C1orf140Q5VVS0 124 aa20.65■□□□□ 0.9
C9orf3-215ENST00000478473 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.65■□□□□ 0.9
C9orf3-215ENST00000478473 COMTD1Q86VU5 262 aa20.65■□□□□ 0.9
C9orf3-215ENST00000478473 TMEM99Q8N816 258 aa20.65■□□□□ 0.9
C9orf3-215ENST00000478473 MFSD8Q8NHS3 518 aa20.65■□□□□ 0.9
C9orf3-215ENST00000478473 CGREF1Q99674 301 aa20.65■□□□□ 0.9
C9orf3-215ENST00000478473 MRGBPQ9NV56 204 aa20.65■□□□□ 0.9
C9orf3-215ENST00000478473 ZNF701Q9NV72 531 aaPredicted RBP20.65■□□□□ 0.9
C9orf3-215ENST00000478473 ZNF446Q9NWS9 450 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms