RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 GTPBP1O00178 669 aaKnown RBP6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 MANBAO00462 879 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 EIF4E2O60573 245 aaKnown RBP6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 SEC14L2O76054 403 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 HSPA4LO95757 839 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 LGI1O95970 557 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 SSTR1P30872 391 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 NTSP30990 170 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 SPRP35270 261 aaPredicted RBP6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 GSTM5P46439 218 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 ATP4BP51164 291 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 PRKAG1P54619 331 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 ARL4CP56559 192 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 LCN2P80188 198 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 C2orf80Q0P641 193 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 PDIA2Q13087 525 aaKnown RBP6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 SNTB2Q13425 540 aaKnown RBP6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 DAG1Q14118 895 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 FAM83EQ2M2I3 478 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 ARMCX4Q5H9R4 360 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 OTUD3Q5T2D3 398 aaPredicted RBP6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 GRTP1Q5TC63 336 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 FAM71E1Q6IPT2 247 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 KRT80Q6KB66 452 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 ZCCHC12Q6PEW1 402 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 RPS27LQ71UM5 84 aaKnown RBP6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 LRP11Q86VZ4 500 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 PTGR2Q8N8N7 351 aaPredicted RBP6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 IL17RDQ8NFM7 739 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 SLC25A43Q8WUT9 341 aaPredicted RBP6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 ST8SIA1Q92185 356 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 PHF21BQ96EK2 531 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 AURKBQ96GD4 344 aaPredicted RBP6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 ZNF385AQ96PM9 386 aaKnown RBP6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 THUMPD3Q9BV44 507 aaKnown RBP6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 BTBD2Q9BX70 525 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 EBPLQ9BY08 206 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 HOXD1Q9GZZ0 328 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 RASSF4Q9H2L5 321 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 PRDM13Q9H4Q3 707 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 ZNF385DQ9H6B1 395 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 MMP26Q9NRE1 261 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 SIRT5Q9NXA8 310 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 CPSF2Q9P2I0 782 aaKnown RBP6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 LEF1Q9UJU2 399 aaPredicted RBP6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 NFU1Q9UMS0 254 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 TRAPPC4Q9Y296 219 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 HDGFL3Q9Y3E1 203 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 AUP1Q9Y679 476 aa6.23□□□□□ -1.41
SPTLC1-205ENST00000477888 COL7A1Q02388 2944 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 RYR2Q92736 4967 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 TCRBV9S1A1TA0A576 114 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 ZNF503-AS2A6NEH8 195 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 STX16-NPEPL1H3BU86 382 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 STX16O14662 325 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 ZNF264O43296 627 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 HOXA3O43365 443 aaPredicted RBP6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 TPD52L2O43399 206 aaKnown RBP6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 TRAF3IP2O43734 574 aaPredicted RBP6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 CDC14BO60729 498 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 FBXO24O75426 580 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 URI1O94763 535 aaPredicted RBP6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 KLHL2O95198 593 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 GPANK1O95872 356 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 OTCP00480 354 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 PF4P02776 101 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 C2P06681 752 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 ANXA4P09525 319 aaPredicted RBP6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 ALOX5P09917 674 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 TFPIP10646 304 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 NAT2P11245 290 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 CRYBB2P43320 205 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 RAD52P43351 418 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 MAGEB1P43366 347 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 MTNR1AP48039 350 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 ATP12AP54707 1039 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 GYS2P54840 703 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 CDH13P55290 713 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 PROK1P58294 105 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 POU6F2P78424 691 aaPredicted RBP6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 ACSM2AQ08AH3 577 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 MERTKQ12866 999 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 HSPB3Q12988 150 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 ZNF154Q13106 437 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 CBFBQ13951 182 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 MAD2L1BPQ15013 274 aaPredicted RBP6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 MMEL1Q495T6 779 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 SPIN4Q56A73 249 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 ARSJQ5FYB0 599 aaPredicted RBP6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 ACSM2BQ68CK6 577 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 CCBE1Q6UXH8 406 aaPredicted RBP6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 LINGO2Q7L985 606 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 AAED1Q7RTV5 226 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 ZBED8Q8IZ13 594 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 LILRB2Q8N423 598 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 COX18Q8N8Q8 333 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 RFWD2Q8NHY2 731 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 LINC01006Q8NI28 216 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 CDKL2Q92772 493 aa6.22□□□□□ -1.41
SPTLC1-205ENST00000477888 KTI12Q96EK9 354 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms