RNA–Protein interactions for RNA: ENST00000477794.2

PRKCD-204, Transcript of protein kinase C delta, humanhuman

TSL 3

Gene PRKCD, Length 404 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-204ENST00000477794 C3orf30Q96M34 536 aa16.29■□□□□ 0.2
PRKCD-204ENST00000477794 ZNF317Q96PQ6 595 aaPredicted RBP16.29■□□□□ 0.2
PRKCD-204ENST00000477794 VRK1Q99986 396 aaPredicted RBP16.29■□□□□ 0.2
PRKCD-204ENST00000477794 SF3B5Q9BWJ5 86 aaKnown RBP16.29■□□□□ 0.2
PRKCD-204ENST00000477794 SAP130Q9H0E3 1048 aa16.29■□□□□ 0.2
PRKCD-204ENST00000477794 TMEM45AQ9NWC5 275 aa16.29■□□□□ 0.2
PRKCD-204ENST00000477794 TMED7Q9Y3B3 224 aa16.29■□□□□ 0.2
PRKCD-204ENST00000477794 HEATR1Q9H583 2144 aaKnown RBP16.28■□□□□ 0.2
PRKCD-204ENST00000477794 PRSS51A0A1B0GVH4 220 aa16.28■□□□□ 0.2
PRKCD-204ENST00000477794 TLDC2A0PJX2 215 aa16.28■□□□□ 0.2
PRKCD-204ENST00000477794 VWC2LB2RUY7 222 aa16.28■□□□□ 0.2
PRKCD-204ENST00000477794 B9A039 149 aa16.28■□□□□ 0.2
PRKCD-204ENST00000477794 PDE5AO76074 875 aa16.28■□□□□ 0.2
PRKCD-204ENST00000477794 TGFAP01135 160 aa16.28■□□□□ 0.2
PRKCD-204ENST00000477794 GPIP06744 558 aa16.28■□□□□ 0.2
PRKCD-204ENST00000477794 CDH2P19022 906 aaPredicted RBP16.28■□□□□ 0.2
PRKCD-204ENST00000477794 SLC1A3P43003 542 aa16.28■□□□□ 0.2
PRKCD-204ENST00000477794 UBE2NP61088 152 aaKnown RBP16.28■□□□□ 0.2
PRKCD-204ENST00000477794 SLC17A1Q14916 467 aa16.28■□□□□ 0.2
PRKCD-204ENST00000477794 MAPK14Q16539 360 aa16.28■□□□□ 0.2
PRKCD-204ENST00000477794 SWI5Q1ZZU3 235 aa16.28■□□□□ 0.2
PRKCD-204ENST00000477794 TSPO2Q5TGU0 170 aa16.28■□□□□ 0.2
PRKCD-204ENST00000477794 AP1ARQ63HQ0 302 aa16.28■□□□□ 0.2
PRKCD-204ENST00000477794 TNFAIP8L2Q6P589 184 aaPredicted RBP16.28■□□□□ 0.2
PRKCD-204ENST00000477794 UGT2A3Q6UWM9 527 aa16.28■□□□□ 0.2
PRKCD-204ENST00000477794 AAED1Q7RTV5 226 aa16.28■□□□□ 0.2
PRKCD-204ENST00000477794 MSI2Q96DH6 328 aaKnown RBP16.28■□□□□ 0.2
PRKCD-204ENST00000477794 DNAJA3Q96EY1 480 aa16.28■□□□□ 0.2
PRKCD-204ENST00000477794 MECRQ9BV79 373 aa16.28■□□□□ 0.2
PRKCD-204ENST00000477794 KATNB1Q9BVA0 655 aa16.28■□□□□ 0.2
PRKCD-204ENST00000477794 DPY30Q9C005 99 aa16.28■□□□□ 0.2
PRKCD-204ENST00000477794 RAB1BQ9H0U4 201 aa16.28■□□□□ 0.2
PRKCD-204ENST00000477794 LY6HO94772 140 aa16.27■□□□□ 0.2
PRKCD-204ENST00000477794 SNUPNO95149 360 aaKnown RBP16.27■□□□□ 0.2
PRKCD-204ENST00000477794 PGRP06401 933 aa16.27■□□□□ 0.2
PRKCD-204ENST00000477794 NUDT17P0C025 328 aa16.27■□□□□ 0.2
PRKCD-204ENST00000477794 ZNF23P17027 643 aa16.27■□□□□ 0.2
PRKCD-204ENST00000477794 NTF4P34130 210 aa16.27■□□□□ 0.2
PRKCD-204ENST00000477794 DPY19L1Q2PZI1 675 aa16.27■□□□□ 0.2
PRKCD-204ENST00000477794 OTUD3Q5T2D3 398 aaPredicted RBP16.27■□□□□ 0.2
PRKCD-204ENST00000477794 ZCCHC23Q6ZST2 131 aa16.27■□□□□ 0.2
PRKCD-204ENST00000477794 SPATA19Q7Z5L4 167 aa16.27■□□□□ 0.2
PRKCD-204ENST00000477794 GSPT2Q8IYD1 628 aaKnown RBP16.27■□□□□ 0.2
PRKCD-204ENST00000477794 ZNF440Q8IYI8 595 aa16.27■□□□□ 0.2
PRKCD-204ENST00000477794 CLEC4FQ8N1N0 589 aa16.27■□□□□ 0.2
PRKCD-204ENST00000477794 TRIML2Q8N7C3 387 aa16.27■□□□□ 0.2
PRKCD-204ENST00000477794 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.27■□□□□ 0.21e-15■■■■■ 72.2
PRKCD-204ENST00000477794 RAB8BQ92930 207 aa16.27■□□□□ 0.2
PRKCD-204ENST00000477794 BOD1Q96IK1 185 aa16.27■□□□□ 0.2
PRKCD-204ENST00000477794 SORCS2Q96PQ0 1159 aa16.27■□□□□ 0.2
PRKCD-204ENST00000477794 SLC38A2Q96QD8 506 aa16.27■□□□□ 0.2
PRKCD-204ENST00000477794 CA10Q9NS85 328 aa16.27■□□□□ 0.2
PRKCD-204ENST00000477794 MARCOQ9UEW3 520 aaPredicted RBP16.27■□□□□ 0.2
PRKCD-204ENST00000477794 CFAP73A6NFT4 308 aa16.26■□□□□ 0.19
PRKCD-204ENST00000477794 ZNF587BE7ETH6 402 aa16.26■□□□□ 0.19
PRKCD-204ENST00000477794 FAAHO00519 579 aa16.26■□□□□ 0.19
PRKCD-204ENST00000477794 CPSF4O95639 269 aaKnown RBP16.26■□□□□ 0.19
PRKCD-204ENST00000477794 PCMT1P22061 227 aa16.26■□□□□ 0.19
PRKCD-204ENST00000477794 CXCR1P25024 350 aa16.26■□□□□ 0.19
PRKCD-204ENST00000477794 TACR3P29371 465 aa16.26■□□□□ 0.19
PRKCD-204ENST00000477794 CLNS1AP54105 237 aaKnown RBP16.26■□□□□ 0.19
PRKCD-204ENST00000477794 FOXG1P55316 489 aaPredicted RBP16.26■□□□□ 0.19
PRKCD-204ENST00000477794 GSTA3Q16772 222 aa16.26■□□□□ 0.19
PRKCD-204ENST00000477794 FRRS1Q6ZNA5 592 aa16.26■□□□□ 0.19
PRKCD-204ENST00000477794 KIRREL3Q8IZU9 778 aa16.26■□□□□ 0.19
PRKCD-204ENST00000477794 RFLNBQ8N5W9 214 aa16.26■□□□□ 0.19
PRKCD-204ENST00000477794 OR9K2Q8NGE7 335 aa16.26■□□□□ 0.19
PRKCD-204ENST00000477794 NEURL3Q96EH8 262 aa16.26■□□□□ 0.19
PRKCD-204ENST00000477794 FOXN4Q96NZ1 517 aa16.26■□□□□ 0.19
PRKCD-204ENST00000477794 TRNT1Q96Q11 434 aaKnown RBP16.26■□□□□ 0.19
PRKCD-204ENST00000477794 PRR14Q9BWN1 585 aa16.26■□□□□ 0.19
PRKCD-204ENST00000477794 TAPBPLQ9BX59 468 aa16.26■□□□□ 0.19
PRKCD-204ENST00000477794 ZDHHC2Q9UIJ5 367 aa16.26■□□□□ 0.19
PRKCD-204ENST00000477794 OSGIN1Q9UJX0 560 aa16.26■□□□□ 0.19
PRKCD-204ENST00000477794 PCDHB14Q9Y5E9 798 aa16.26■□□□□ 0.19
PRKCD-204ENST00000477794 VAMP5O95183 116 aa16.25■□□□□ 0.19
PRKCD-204ENST00000477794 SRP14P37108 136 aaKnown RBP16.25■□□□□ 0.19
PRKCD-204ENST00000477794 PPOXP50336 477 aa16.25■□□□□ 0.19
PRKCD-204ENST00000477794 COPZ1P61923 177 aa16.25■□□□□ 0.19
PRKCD-204ENST00000477794 SLC25A3Q00325 362 aa16.25■□□□□ 0.19
PRKCD-204ENST00000477794 SAXO2Q658L1 398 aa16.25■□□□□ 0.19
PRKCD-204ENST00000477794 TMEM225Q6GV28 225 aa16.25■□□□□ 0.19
PRKCD-204ENST00000477794 IL17RELQ6ZVW7 336 aa16.25■□□□□ 0.19
PRKCD-204ENST00000477794 OLIG3Q7RTU3 272 aa16.25■□□□□ 0.19
PRKCD-204ENST00000477794 GPAT4Q86UL3 456 aa16.25■□□□□ 0.19
PRKCD-204ENST00000477794 OR4F15Q8NGB8 312 aa16.25■□□□□ 0.19
PRKCD-204ENST00000477794 TESCQ96BS2 214 aa16.25■□□□□ 0.19
PRKCD-204ENST00000477794 SLC35A5Q9BS91 424 aa16.25■□□□□ 0.19
PRKCD-204ENST00000477794 MTHFD2LQ9H903 347 aaPredicted RBP16.25■□□□□ 0.19
PRKCD-204ENST00000477794 SLC17A7Q9P2U7 560 aa16.25■□□□□ 0.19
PRKCD-204ENST00000477794 MALRD1Q5VYJ5 2156 aa16.25■□□□□ 0.19
PRKCD-204ENST00000477794 IGHV4-61A0A0C4DH41 118 aa16.24■□□□□ 0.19
PRKCD-204ENST00000477794 SLC35F4A4IF30 521 aa16.24■□□□□ 0.19
PRKCD-204ENST00000477794 AGAP5A6NIR3 686 aa16.24■□□□□ 0.19
PRKCD-204ENST00000477794 KLF11O14901 512 aa16.24■□□□□ 0.19
PRKCD-204ENST00000477794 TCF21O43680 179 aa16.24■□□□□ 0.19
PRKCD-204ENST00000477794 SCN2BO60939 215 aa16.24■□□□□ 0.19
PRKCD-204ENST00000477794 OR4A8P0C604 315 aa16.24■□□□□ 0.19
PRKCD-204ENST00000477794 MYZAPP0CAP1 466 aa16.24■□□□□ 0.19
PRKCD-204ENST00000477794 IL7RP16871 459 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms