RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-210	ENST00000477625	TAB1	Q15750	504 aa		10.83	□□□□□ -0.68
PTPN7-210	ENST00000477625	ACKR1	Q16570	336 aa		10.83	□□□□□ -0.68
PTPN7-210	ENST00000477625	FBXW9	Q5XUX1	488 aa		10.83	□□□□□ -0.68
PTPN7-210	ENST00000477625	ALKBH2	Q6NS38	261 aa		10.83	□□□□□ -0.68
PTPN7-210	ENST00000477625	DHRS4L2	Q6PKH6	230 aa		10.83	□□□□□ -0.68
PTPN7-210	ENST00000477625	PAQR6	Q6TCH4	344 aa		10.83	□□□□□ -0.68
PTPN7-210	ENST00000477625	BHLHA15	Q7RTS1	189 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN7-210	ENST00000477625	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	10.83	□□□□□ -0.68
PTPN7-210	ENST00000477625	DHDDS	Q86SQ9	333 aa		10.83	□□□□□ -0.68
PTPN7-210	ENST00000477625	ATG4D	Q86TL0	474 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN7-210	ENST00000477625	LSR	Q86X29	649 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN7-210	ENST00000477625	APH1A	Q96BI3	265 aa		10.83	□□□□□ -0.68
PTPN7-210	ENST00000477625	C3orf49	Q96BT1	292 aa		10.83	□□□□□ -0.68
PTPN7-210	ENST00000477625	PLPPR2	Q96GM1	343 aa		10.83	□□□□□ -0.68
PTPN7-210	ENST00000477625	ANKRD27	Q96NW4	1050 aa		10.83	□□□□□ -0.68
PTPN7-210	ENST00000477625	ZNF607	Q96SK3	696 aa		10.83	□□□□□ -0.68
PTPN7-210	ENST00000477625	FGFR1OP2	Q9NVK5	253 aa		10.83	□□□□□ -0.68
PTPN7-210	ENST00000477625	BEX4	Q9NWD9	120 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN7-210	ENST00000477625	PRORSD1P	A6NEY8	169 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	SERPINB7	O75635	380 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	LYZL6	O75951	148 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	AKR7A3	O95154	331 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	IGHV3-9	P01782	118 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	VIM	P08670	466 aa	Known RBP	10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	COX5A	P20674	150 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	IGHV1-2	P23083	117 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	ADSL	P30566	484 aa	Predicted RBP	10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	ARFIP2	P53365	341 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	NFYC	Q13952	458 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	OR7A5	Q15622	319 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	HSP90B2P	Q58FF3	399 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	OTUD3	Q5T2D3	398 aa	Predicted RBP	10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	TGIF2LY	Q8IUE0	185 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	UBE2J2	Q8N2K1	259 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	TMEM99	Q8N816	258 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	LSMEM1	Q8N8F7	131 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	HIPK4	Q8NE63	616 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	STK35	Q8TDR2	534 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	PIGT	Q969N2	578 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	CGREF1	Q99674	301 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	TMEM204	Q9BSN7	226 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	TAPBPL	Q9BX59	468 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	UBTD1	Q9HAC8	227 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	NGB	Q9NPG2	151 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	MRGBP	Q9NV56	204 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	PARPBP	Q9NWS1	579 aa		10.82	□□□□□ -0.68
PTPN7-210	ENST00000477625	AQP7P3	A6NL99	342 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	TMEM229A	B2RXF0	380 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	TPST1	O60507	370 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	NPIPB7	O75200	414 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	MFN2	O95140	757 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	GGT1	P19440	569 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	AQP1	P29972	269 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	MTPN	P58546	118 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	ADAM8	P78325	824 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	RBBP4	Q09028	425 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	CAPRIN1	Q14444	709 aa	Known RBP	10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	CYP51A1	Q16850	503 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	GLIPR1L2	Q4G1C9	344 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	C1orf140	Q5VVS0	124 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	TMEM225	Q6GV28	225 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	ZNF704	Q6ZNC4	412 aa	Predicted RBP	10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	C20orf204	Q6ZNR8	217 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	SSX8	Q7RTT4	187 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	COMTD1	Q86VU5	262 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	P2RY8	Q86VZ1	359 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	PTOV1	Q86YD1	416 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	ARMC8	Q8IUR7	673 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	ZNF433	Q8N7K0	673 aa	Predicted RBP	10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	C11orf65	Q8NCR3	313 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	OR52E4	Q8NGH9	312 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	PIP5K1A	Q99755	562 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	SF3B5	Q9BWJ5	86 aa	Known RBP	10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	TRIM2	Q9C040	744 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	CCDC134	Q9H6E4	229 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	ESRP2	Q9H6T0	727 aa	Known RBP	10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	KAT8	Q9H7Z6	458 aa	Known RBP	10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	C12orf10	Q9HB07	376 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	ASB6	Q9NWX5	421 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	ADPRHL2	Q9NX46	363 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	RPS6KB2	Q9UBS0	482 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	ANGPT4	Q9Y264	503 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	SLC9A8	Q9Y2E8	581 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	FLVCR1	Q9Y5Y0	555 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	VPS13C	Q709C8	3753 aa		10.81	□□□□□ -0.68
PTPN7-210	ENST00000477625	ZNF469	Q96JG9	3925 aa	Predicted RBP	10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625		A0A1B0GWA3	101 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	ELOA3D	A6NLF2	546 aa	Predicted RBP	10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	FBP2	O00757	339 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	VAMP5	O95183	116 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	PLAU	P00749	431 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	PNMT	P11086	282 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	CD99	P14209	185 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	HTR2A	P28223	471 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	HOXC12	P31275	282 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	PCBP3	P57721	371 aa	Known RBP	10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	GUCY1A3	Q02108	690 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	EGR4	Q05215	589 aa		10.8	□□□□□ -0.68
PTPN7-210	ENST00000477625	FAP	Q12884	760 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms