RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 ZNF542PQ5EBM4 170 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 SLC25A30Q5SVS4 291 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 TPRG1LQ5T0D9 272 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 KCTD16Q68DU8 428 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 KDM7AQ6ZMT4 941 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 TIFABQ6ZNK6 161 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 FRA10AC1Q70Z53 315 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 CMC1Q7Z7K0 106 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 LCA5Q86VQ0 697 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 CPNE9Q8IYJ1 553 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 C4orf33Q8N1A6 199 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 SLC22A18ASQ8N1D0 253 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 CCDC63Q8NA47 563 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 Q8NFD4 153 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 LKAAEAR1Q8TD35 194 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 CD200R1Q8TD46 325 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 LMX1AQ8TE12 382 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 SMAP2Q8WU79 429 aaPredicted RBP3.3□□□□□ -1.88
UBR3-209ENST00000477461 NAT14Q8WUY8 206 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 KCTD4Q8WVF5 259 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 OR1E3Q8WZA6 343 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 CXorf40BQ96DE9 158 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 PDXPQ96GD0 296 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 ZNF486Q96H40 463 aaPredicted RBP3.3□□□□□ -1.88
UBR3-209ENST00000477461 ATP6V1G3Q96LB4 118 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 BIRC8Q96P09 236 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 SELENOSQ9BQE4 189 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 CCDC3Q9BQI4 270 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 GTPBP2Q9BX10 602 aaKnown RBP3.3□□□□□ -1.88
UBR3-209ENST00000477461 WWTR1Q9GZV5 400 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 COG4Q9H9E3 785 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 MED4Q9NPJ6 270 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 MRPL40Q9NQ50 206 aaKnown RBP3.3□□□□□ -1.88
UBR3-209ENST00000477461 NKIRAS1Q9NYS0 192 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 DCDC2Q9UHG0 476 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 PSMD13Q9UNM6 376 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 RUVBL2Q9Y230 463 aaKnown RBP3.3□□□□□ -1.88
UBR3-209ENST00000477461 KCNK6Q9Y257 313 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 HEBP2Q9Y5Z4 205 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 SLCO1B1Q9Y6L6 691 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 CACNA1EQ15878 2313 aa3.3□□□□□ -1.88
UBR3-209ENST00000477461 SLC5A10A0PJK1 596 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 HTR3EA5X5Y0 456 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 OR5K4A6NMS3 321 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 SYCE1LA8MT33 242 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 EPM2AB3EWF7 344 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 SUPT3HB4E1H0 165 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 ZW10O43264 779 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 AQP9O43315 295 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 ZBTB14O43829 449 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 SDC3O75056 442 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 SMIM24O75264 130 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 SPAG7O75391 227 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 SUPT3HO75486 399 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 KLHL2O95198 593 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 CATP04040 527 aaKnown RBP3.29□□□□□ -1.88
UBR3-209ENST00000477461 ATP1B1P05026 303 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 C8GP07360 202 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 SLC35E2BP0CK96 405 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 F3P13726 295 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 CD1DP15813 335 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 AZGP1P25311 298 aaKnown RBP3.29□□□□□ -1.88
UBR3-209ENST00000477461 AK4P27144 223 aaPredicted RBP3.29□□□□□ -1.88
UBR3-209ENST00000477461 CCR7P32248 378 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 MAGEA12P43365 314 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 NPY4RP50391 375 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 MTCP1P56278 107 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 IRX4P78413 519 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 MZT1Q08AG7 82 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 ASPHQ12797 758 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 C1orf61Q13536 156 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 TSTA3Q13630 321 aaPredicted RBP3.29□□□□□ -1.88
UBR3-209ENST00000477461 TAB1Q15750 504 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 ZKSCAN8Q15776 578 aaPredicted RBP3.29□□□□□ -1.88
UBR3-209ENST00000477461 RBBP7Q16576 425 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 CCDC153Q494R4 210 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 ACSBG2Q5FVE4 666 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 N4BP2L1Q5TBK1 243 aaPredicted RBP3.29□□□□□ -1.88
UBR3-209ENST00000477461 HHATQ5VTY9 493 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 UNC5DQ6UXZ4 953 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 FCRLAQ7L513 359 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 NRARPQ7Z6K4 114 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 ADAMTSL2Q86TH1 951 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 AMIGO1Q86WK6 493 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 HPS6Q86YV9 775 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 ZNF547Q8IVP9 402 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 SLC22A15Q8IZD6 547 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 ARFGAP2Q8N6H7 521 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 Q8NBF4 154 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 PRSS33Q8NF86 280 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 OR5T2Q8NGG2 359 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 STAG3L4Q8TBR4 150 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 MCOLN3Q8TDD5 553 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 EEF1AKMT1Q8WVE0 214 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 DYDC1Q8WWB3 177 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 TFGQ92734 400 aaPredicted RBP3.29□□□□□ -1.88
UBR3-209ENST00000477461 FAM162AQ96A26 154 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 RAD51AP1Q96B01 352 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 TLCD1Q96CP7 247 aa3.29□□□□□ -1.88
UBR3-209ENST00000477461 PDLIM5Q96HC4 596 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms