RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 SEC23BQ15437 767 aa15.31■□□□□ 0.04
EPHB4-204ENST00000477446 TBCEQ15813 527 aaPredicted RBP15.31■□□□□ 0.04
EPHB4-204ENST00000477446 SMN1Q16637 294 aaKnown RBP15.31■□□□□ 0.04
EPHB4-204ENST00000477446 EIPR1Q53HC9 387 aa15.31■□□□□ 0.04
EPHB4-204ENST00000477446 RNFT1Q5M7Z0 435 aa15.31■□□□□ 0.04
EPHB4-204ENST00000477446 C1orf94Q6P1W5 598 aa15.31■□□□□ 0.04
EPHB4-204ENST00000477446 PODNL1Q6PEZ8 512 aa15.31■□□□□ 0.04
EPHB4-204ENST00000477446 Q6ZPB1 254 aaPredicted RBP15.31■□□□□ 0.04
EPHB4-204ENST00000477446 PTCHD4Q6ZW05 846 aa15.31■□□□□ 0.04
EPHB4-204ENST00000477446 PLCZ1Q86YW0 608 aa15.31■□□□□ 0.04
EPHB4-204ENST00000477446 LACC1Q8IV20 430 aa15.31■□□□□ 0.04
EPHB4-204ENST00000477446 MISPQ8IVT2 679 aa15.31■□□□□ 0.04
EPHB4-204ENST00000477446 GGHQ92820 318 aa15.31■□□□□ 0.04
EPHB4-204ENST00000477446 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.31■□□□□ 0.04
EPHB4-204ENST00000477446 ZNF443Q9Y2A4 671 aaPredicted RBP15.31■□□□□ 0.04
EPHB4-204ENST00000477446 ZFYVE26Q68DK2 2539 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 AP3D1O14617 1153 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 SLC22A1O15245 554 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 OIP5O43482 229 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 BCAS1O75363 584 aaPredicted RBP15.3■□□□□ 0.04
EPHB4-204ENST00000477446 EPPINO95925 133 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 CSTAP01040 98 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 TAS2R41P59536 307 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 PLAURQ03405 335 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 TRAM2Q15035 370 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 HYAL4Q2M3T9 481 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 NDUFAF6Q330K2 333 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 ENTPD8Q5MY95 495 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 CBLN3Q6UW01 205 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 LINC00299Q6ZSB3 139 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 AHSA2Q719I0 299 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 CROCCP3Q8IVE0 287 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 CISD2Q8N5K1 135 aaKnown RBP15.3■□□□□ 0.04
EPHB4-204ENST00000477446 YIPF6Q96EC8 236 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 NAA50Q9GZZ1 169 aaKnown RBP15.3■□□□□ 0.04
EPHB4-204ENST00000477446 MED11Q9P086 117 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 AASSQ9UDR5 926 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 FBXL2Q9UKC9 423 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 CARD8Q9Y2G2 431 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 NTNG1Q9Y2I2 539 aa15.3■□□□□ 0.04
EPHB4-204ENST00000477446 IGLV3-32A0A0A0MS00 114 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 A0A1W2PPW3 197 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 FAM166BA8MTA8 275 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 GTPBP1O00178 669 aaKnown RBP15.29■□□□□ 0.04
EPHB4-204ENST00000477446 ZNF264O43296 627 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 GMFGO60234 142 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 CYP7B1O75881 506 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 GABARAPO95166 117 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 UBL4AP11441 157 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 PIPP12273 146 aaPredicted RBP15.29■□□□□ 0.04
EPHB4-204ENST00000477446 ENDOUP21128 410 aaKnown RBP15.29■□□□□ 0.04
EPHB4-204ENST00000477446 CALRP27797 417 aaKnown RBP15.29■□□□□ 0.04
EPHB4-204ENST00000477446 PPIAP62937 165 aaKnown RBP15.29■□□□□ 0.04
EPHB4-204ENST00000477446 EEF1A1P68104 462 aaKnown RBP15.29■□□□□ 0.04
EPHB4-204ENST00000477446 ZNF117Q03924 483 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 DCTN2Q13561 401 aaKnown RBP15.29■□□□□ 0.04
EPHB4-204ENST00000477446 MRPL2Q5T653 305 aaKnown RBP15.29■□□□□ 0.04
EPHB4-204ENST00000477446 C12orf73Q69YU5 71 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 CASP12Q6UXS9 341 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 ZNF836Q6ZNA1 936 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 CCDC103Q8IW40 242 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 STX19Q8N4C7 294 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 FADS6Q8N9I5 356 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 OR2M3Q8NG83 312 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 GNPDA2Q8TDQ7 276 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 SH3YL1Q96HL8 342 aaPredicted RBP15.29■□□□□ 0.04
EPHB4-204ENST00000477446 DCUN1D5Q9BTE7 237 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 DSN1Q9H410 356 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 ARMC7Q9H6L4 198 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 SLC35A3Q9Y2D2 325 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 CHST2Q9Y4C5 530 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 HEATR5AQ86XA9 2040 aa15.29■□□□□ 0.04
EPHB4-204ENST00000477446 HCRTR2O43614 444 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 CBR3O75828 277 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 OR5F1O95221 314 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 ZNF24P17028 368 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 SKP2Q13309 424 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 PRR30Q53SZ7 412 aaPredicted RBP15.28■□□□□ 0.04
EPHB4-204ENST00000477446 TMEM201Q5SNT2 666 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 SLC25A30Q5SVS4 291 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 FAM180AQ6UWF9 173 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 SLC22A16Q86VW1 577 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 CMIPQ8IY22 773 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 CLIP4Q8N3C7 705 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 TMEM251Q8N6I4 163 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 FAM71CQ8NEG0 241 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 OR4K5Q8NGD3 323 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 OR8J1Q8NGP2 316 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 B4GALNT2Q8NHY0 566 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 CNOT9Q92600 299 aaKnown RBP15.28■□□□□ 0.04
EPHB4-204ENST00000477446 SNRNP40Q96DI7 357 aaKnown RBP15.28■□□□□ 0.04
EPHB4-204ENST00000477446 WFDC6Q9BQY6 131 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 UBQLN3Q9H347 655 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 ZNF703Q9H7S9 590 aaPredicted RBP15.28■□□□□ 0.04
EPHB4-204ENST00000477446 HHATLQ9HCP6 504 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 MAN2C1Q9NTJ4 1040 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 ICAM5Q9UMF0 924 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 FREM3P0C091 2139 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 CDHR4A6H8M9 788 aa15.28■□□□□ 0.04
EPHB4-204ENST00000477446 TTLL8A6PVC2 850 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms