RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 PMF1-BGLAPU3KQ54 211 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 C17orf51A8MQB3 221 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 A8MV72 311 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-214ENST00000477152 SULT2B1O00204 365 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 LSM1O15116 133 aaKnown RBP6.42□□□□□ -1.38
BRCA1-214ENST00000477152 CYTIPO60759 359 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 PLAUP00749 431 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 BCKDHAP12694 445 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 SLC25A16P16260 332 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 KRT4P19013 534 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 GNALP38405 381 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 APOBEC1P41238 236 aaKnown RBP6.42□□□□□ -1.38
BRCA1-214ENST00000477152 HTR3AP46098 478 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 CDH11P55287 796 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 HPCAP84074 193 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 BSPH1Q075Z2 132 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 GNA13Q14344 377 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 RFTN2Q52LD8 501 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-214ENST00000477152 CCNJQ5T5M9 372 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 UBAP2Q5T6F2 1119 aaKnown RBP6.42□□□□□ -1.38
BRCA1-214ENST00000477152 NXNQ6DKJ4 435 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 ANKRD26P1Q6NSI1 321 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 EIF3MQ7L2H7 374 aaKnown RBP6.42□□□□□ -1.38
BRCA1-214ENST00000477152 C16orf62Q7Z3J2 963 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 ABHD12BQ7Z5M8 362 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-214ENST00000477152 HIPK1Q86Z02 1210 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 C17orf53Q8N3J3 647 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-214ENST00000477152 RIBC1Q8N443 379 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-214ENST00000477152 ZNF563Q8TA94 476 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 POC1BQ8TC44 478 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 GPR119Q8TDV5 335 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 MZB1Q8WU39 189 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 TWIST2Q8WVJ9 160 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 PMM1Q92871 262 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 APH1AQ96BI3 265 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 C16orf58Q96GQ5 468 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 ZIM3Q96PE6 472 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 OR5B2Q96R09 309 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 NAA11Q9BSU3 229 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-214ENST00000477152 MOV10Q9HCE1 1003 aaKnown RBP6.42□□□□□ -1.38
BRCA1-214ENST00000477152 GCM1Q9NP62 436 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 POLE3Q9NRF9 147 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 ICAM5Q9UMF0 924 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 SLC35A3Q9Y2D2 325 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 CCL27Q9Y4X3 112 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 A0A1W2PPM1 405 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 SERINC4A6NH21 518 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 CCT8L1PA6NM43 557 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 MRPL33O75394 65 aaKnown RBP6.41□□□□□ -1.38
BRCA1-214ENST00000477152 CYP7B1O75881 506 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 DANCRP0C864 163 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 TFPIP10646 304 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 MATN1P21941 496 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 SOAT1P35610 550 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 MAGEA8P43361 318 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 MAP2K6P52564 334 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 TXNL4AP83876 142 aaKnown RBP6.41□□□□□ -1.38
BRCA1-214ENST00000477152 QPRTQ15274 297 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 SMU1Q2TAY7 513 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 FAM153CQ494X1 144 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 FBXW9Q5XUX1 488 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 ZNF544Q6NX49 715 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 SLC22A25Q6T423 547 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 KLHL24Q6TFL4 600 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 Q6ZSR9 355 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 NUFIP2Q7Z417 695 aaKnown RBP6.41□□□□□ -1.38
BRCA1-214ENST00000477152 DTX2Q86UW9 622 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 FNDC5Q8NAU1 212 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 CLHC1Q8NHS4 586 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 PSMA8Q8TAA3 256 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 RAB3IL1Q8TBN0 382 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 DHRS9Q9BPW9 319 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 PSD2Q9BQI7 771 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 TRAF4Q9BUZ4 470 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-214ENST00000477152 CBLN4Q9NTU7 201 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 UPB1Q9UBR1 384 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 BAIAP2L1Q9UHR4 511 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 EMCNQ9ULC0 261 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 NOSIPQ9Y314 301 aaKnown RBP6.41□□□□□ -1.38
BRCA1-214ENST00000477152 HDGFL3Q9Y3E1 203 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 DNAJC15Q9Y5T4 150 aa6.41□□□□□ -1.38
BRCA1-214ENST00000477152 OR5H1A6NKK0 313 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 ABCD4O14678 606 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 EIF1BO60739 113 aaKnown RBP6.4□□□□□ -1.38
BRCA1-214ENST00000477152 CSTAP01040 98 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 GUSBP08236 651 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 HNF1AP20823 631 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 ACVR1BP36896 505 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 CDKN1AP38936 164 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 FABP6P51161 128 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 ZNF844Q08AG5 666 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 MERTKQ12866 999 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 CD226Q15762 336 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 TIGD2Q4W5G0 525 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 ZNF385BQ569K4 471 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 ANXA8L1Q5VT79 327 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 TMPPEQ6ZT21 453 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 C10orf107Q8IVU9 208 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 ZNF619Q8N2I2 560 aa6.4□□□□□ -1.38
BRCA1-214ENST00000477152 KBTBD8Q8NFY9 601 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms