RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 SLC35A1P78382 337 aa26.44■■□□□ 1.82
HOXB3-208ENST00000476342 MTX3Q5HYI7 312 aa26.44■■□□□ 1.82
HOXB3-208ENST00000476342 EEF1A1P5Q5VTE0 462 aa26.44■■□□□ 1.82
HOXB3-208ENST00000476342 ROBO4Q8WZ75 1007 aa26.44■■□□□ 1.82
HOXB3-208ENST00000476342 MPP4Q96JB8 637 aa26.44■■□□□ 1.82
HOXB3-208ENST00000476342 SFXN3Q9BWM7 321 aa26.44■■□□□ 1.82
HOXB3-208ENST00000476342 TAPBPLQ9BX59 468 aa26.44■■□□□ 1.82
HOXB3-208ENST00000476342 GLRX2Q9NS18 164 aa26.44■■□□□ 1.82
HOXB3-208ENST00000476342 SLC7A7Q9UM01 511 aa26.44■■□□□ 1.82
HOXB3-208ENST00000476342 DNAJC8O75937 253 aaPredicted RBP26.43■■□□□ 1.82
HOXB3-208ENST00000476342 STAMBPO95630 424 aa26.43■■□□□ 1.82
HOXB3-208ENST00000476342 IL18BPO95998 194 aa26.43■■□□□ 1.82
HOXB3-208ENST00000476342 IMPDH2P12268 514 aa26.43■■□□□ 1.82
HOXB3-208ENST00000476342 EGR4Q05215 589 aa26.43■■□□□ 1.82
HOXB3-208ENST00000476342 RNPS1Q15287 305 aaKnown RBP26.43■■□□□ 1.82
HOXB3-208ENST00000476342 LILRB4Q8NHJ6 448 aa26.43■■□□□ 1.82
HOXB3-208ENST00000476342 CCDC124Q96CT7 223 aaKnown RBP26.43■■□□□ 1.82
HOXB3-208ENST00000476342 ASB9Q96DX5 294 aa26.43■■□□□ 1.82
HOXB3-208ENST00000476342 SLC41A3Q96GZ6 507 aa26.43■■□□□ 1.82
HOXB3-208ENST00000476342 CLPTM1LQ96KA5 538 aa26.43■■□□□ 1.82
HOXB3-208ENST00000476342 PRRC1Q96M27 445 aa26.43■■□□□ 1.82
HOXB3-208ENST00000476342 EPYCQ99645 322 aa26.43■■□□□ 1.82
HOXB3-208ENST00000476342 AMBRA1Q9C0C7 1298 aa26.43■■□□□ 1.82
HOXB3-208ENST00000476342 EIF1BO60739 113 aaKnown RBP26.42■■□□□ 1.82
HOXB3-208ENST00000476342 PRKD3O94806 890 aa26.42■■□□□ 1.82
HOXB3-208ENST00000476342 BMP5P22003 454 aa26.42■■□□□ 1.82
HOXB3-208ENST00000476342 TSPYL5Q86VY4 417 aaPredicted RBP26.42■■□□□ 1.82
HOXB3-208ENST00000476342 DHFR2Q86XF0 187 aa26.42■■□□□ 1.82
HOXB3-208ENST00000476342 GMPPAQ96IJ6 420 aaPredicted RBP26.42■■□□□ 1.82
HOXB3-208ENST00000476342 TMEM43Q9BTV4 400 aa26.42■■□□□ 1.82
HOXB3-208ENST00000476342 DOPEY2Q9Y3R5 2298 aa26.42■■□□□ 1.82
HOXB3-208ENST00000476342 IGHV3-15A0A0B4J1V0 119 aa26.41■■□□□ 1.82
HOXB3-208ENST00000476342 SMAD9O15198 467 aaKnown RBP26.41■■□□□ 1.82
HOXB3-208ENST00000476342 OR2T1O43869 369 aa26.41■■□□□ 1.82
HOXB3-208ENST00000476342 THRBP10828 461 aa26.41■■□□□ 1.82
HOXB3-208ENST00000476342 AGFG1P52594 562 aaKnown RBP26.41■■□□□ 1.82
HOXB3-208ENST00000476342 FOXF2Q12947 444 aa26.41■■□□□ 1.82
HOXB3-208ENST00000476342 PIN1Q13526 163 aaPredicted RBP26.41■■□□□ 1.82
HOXB3-208ENST00000476342 OR7A5Q15622 319 aa26.41■■□□□ 1.82
HOXB3-208ENST00000476342 SLC25A35Q3KQZ1 300 aa26.41■■□□□ 1.82
HOXB3-208ENST00000476342 CYP2R1Q6VVX0 501 aa26.41■■□□□ 1.82
HOXB3-208ENST00000476342 GDF7Q7Z4P5 450 aa26.41■■□□□ 1.82
HOXB3-208ENST00000476342 MCUR1Q96AQ8 359 aa26.41■■□□□ 1.82
HOXB3-208ENST00000476342 PYURFQ96I23 114 aa26.41■■□□□ 1.82
HOXB3-208ENST00000476342 KLHL9Q9P2J3 617 aa26.41■■□□□ 1.82
HOXB3-208ENST00000476342 RIMS3Q9UJD0 308 aa26.41■■□□□ 1.82
HOXB3-208ENST00000476342 V9GYQ6 96 aa26.41■■□□□ 1.82
HOXB3-208ENST00000476342 CACNA1CQ13936 2221 aa26.4■■□□□ 1.82
HOXB3-208ENST00000476342 IGKV1D-42A0A075B6H8 117 aa26.4■■□□□ 1.82
HOXB3-208ENST00000476342 TRAV36DV7A0A075B6V5 113 aa26.4■■□□□ 1.82
HOXB3-208ENST00000476342 LIPT2A6NK58 231 aa26.4■■□□□ 1.82
HOXB3-208ENST00000476342 THY1P04216 161 aa26.4■■□□□ 1.82
HOXB3-208ENST00000476342 FPR1P21462 350 aa26.4■■□□□ 1.82
HOXB3-208ENST00000476342 ST3GAL3Q11203 375 aa26.4■■□□□ 1.82
HOXB3-208ENST00000476342 LCN8Q6JVE9 175 aa26.4■■□□□ 1.82
HOXB3-208ENST00000476342 TTC33Q6PID6 262 aaPredicted RBP26.4■■□□□ 1.82
HOXB3-208ENST00000476342 LINC00114Q6XXX2 140 aa26.4■■□□□ 1.82
HOXB3-208ENST00000476342 CYP4Z1Q86W10 505 aa26.4■■□□□ 1.82
HOXB3-208ENST00000476342 LSRQ86X29 649 aaPredicted RBP26.4■■□□□ 1.82
HOXB3-208ENST00000476342 CNEP1R1Q8N9A8 125 aa26.4■■□□□ 1.82
HOXB3-208ENST00000476342 MFSD8Q8NHS3 518 aa26.4■■□□□ 1.82
HOXB3-208ENST00000476342 ABHD3Q8WU67 409 aa26.4■■□□□ 1.82
HOXB3-208ENST00000476342 KTI12Q96EK9 354 aaPredicted RBP26.4■■□□□ 1.82
HOXB3-208ENST00000476342 NAA11Q9BSU3 229 aaPredicted RBP26.4■■□□□ 1.82
HOXB3-208ENST00000476342 EMC9Q9Y3B6 208 aa26.4■■□□□ 1.82
HOXB3-208ENST00000476342 COL12A1Q99715 3063 aa26.4■■□□□ 1.82
HOXB3-208ENST00000476342 A0A1W2PNV4 684 aa26.39■■□□□ 1.82
HOXB3-208ENST00000476342 FAM90A27PA6NNH2 459 aa26.39■■□□□ 1.82
HOXB3-208ENST00000476342 EBAG9O00559 213 aa26.39■■□□□ 1.82
HOXB3-208ENST00000476342 GTF2E2P29084 291 aaKnown RBP26.39■■□□□ 1.82
HOXB3-208ENST00000476342 RPS5P46782 204 aaKnown RBP26.39■■□□□ 1.82
HOXB3-208ENST00000476342 CTBP2P56545 445 aa26.39■■□□□ 1.82
HOXB3-208ENST00000476342 FAM69AQ5T7M9 428 aa26.39■■□□□ 1.82
HOXB3-208ENST00000476342 CCDC121Q6ZUS5 278 aa26.39■■□□□ 1.82
HOXB3-208ENST00000476342 LIX1LQ8IVB5 337 aa26.39■■□□□ 1.82
HOXB3-208ENST00000476342 FAM86B1Q8N7N1 296 aa26.39■■□□□ 1.82
HOXB3-208ENST00000476342 POP5Q969H6 163 aaKnown RBP26.39■■□□□ 1.82
HOXB3-208ENST00000476342 GP6Q9HCN6 339 aa26.39■■□□□ 1.82
HOXB3-208ENST00000476342 A4GNTQ9UNA3 340 aa26.39■■□□□ 1.82
HOXB3-208ENST00000476342 SPTAN1Q13813 2472 aaKnown RBP26.39■■□□□ 1.81
HOXB3-208ENST00000476342 CYTIPO60759 359 aa26.39■■□□□ 1.81
HOXB3-208ENST00000476342 SS18L1O75177 396 aaPredicted RBP26.39■■□□□ 1.81
HOXB3-208ENST00000476342 LYPD3O95274 346 aa26.39■■□□□ 1.81
HOXB3-208ENST00000476342 ATP6V1B2P21281 511 aa26.39■■□□□ 1.81
HOXB3-208ENST00000476342 CDSNQ15517 529 aa26.39■■□□□ 1.81
HOXB3-208ENST00000476342 PAQR6Q6TCH4 344 aa26.39■■□□□ 1.81
HOXB3-208ENST00000476342 FAM214BQ7L5A3 538 aa26.39■■□□□ 1.81
HOXB3-208ENST00000476342 PIGXQ8TBF5 258 aa26.39■■□□□ 1.81
HOXB3-208ENST00000476342 LRGUKQ96M69 825 aa26.39■■□□□ 1.81
HOXB3-208ENST00000476342 PTDSS2Q9BVG9 487 aa26.39■■□□□ 1.81
HOXB3-208ENST00000476342 KCNJ16Q9NPI9 418 aa26.39■■□□□ 1.81
HOXB3-208ENST00000476342 ENPP4Q9Y6X5 453 aa26.39■■□□□ 1.81
HOXB3-208ENST00000476342 GSC2O15499 205 aa26.38■■□□□ 1.81
HOXB3-208ENST00000476342 TNFSF13O75888 250 aa26.38■■□□□ 1.81
HOXB3-208ENST00000476342 YAP1P46937 504 aaKnown RBP26.38■■□□□ 1.81
HOXB3-208ENST00000476342 H3F3AP84243 136 aa26.38■■□□□ 1.81
HOXB3-208ENST00000476342 MS4A2Q01362 244 aa26.38■■□□□ 1.81
HOXB3-208ENST00000476342 RASGEF1BQ0VAM2 473 aa26.38■■□□□ 1.81
HOXB3-208ENST00000476342 TRAP1Q12931 704 aaKnown RBP26.38■■□□□ 1.81
HOXB3-208ENST00000476342 GUSBP1Q15486 140 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms