RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.32□□□□□ -1.4
UBE4B-208ENST00000475795 TMEM160Q9NX00 188 aa6.32□□□□□ -1.4
UBE4B-208ENST00000475795 TMEM181Q9P2C4 612 aa6.32□□□□□ -1.4
UBE4B-208ENST00000475795 DCTN4Q9UJW0 460 aa6.32□□□□□ -1.4
UBE4B-208ENST00000475795 CDC42EP3Q9UKI2 254 aa6.32□□□□□ -1.4
UBE4B-208ENST00000475795 PCDHGB4Q9UN71 923 aa6.32□□□□□ -1.4
UBE4B-208ENST00000475795 TRAPPC4Q9Y296 219 aa6.32□□□□□ -1.4
UBE4B-208ENST00000475795 SLC9A8Q9Y2E8 581 aa6.32□□□□□ -1.4
UBE4B-208ENST00000475795 TMED7-TICAM2A0A0A6YYA0 188 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 PRSS51A0A1B0GVH4 220 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 PRAMEF27A3QJZ7 478 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 ZNF208O43345 1280 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 ITM2AO43736 263 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 TYROBPO43914 113 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 EIF1BO60739 113 aaKnown RBP6.31□□□□□ -1.4
UBE4B-208ENST00000475795 CPSF4O95639 269 aaKnown RBP6.31□□□□□ -1.4
UBE4B-208ENST00000475795 CSF3P09919 207 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 CREB1P16220 341 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 LORP23490 312 aaPredicted RBP6.31□□□□□ -1.4
UBE4B-208ENST00000475795 HTR3AP46098 478 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 IDH2P48735 452 aaKnown RBP6.31□□□□□ -1.4
UBE4B-208ENST00000475795 OR2B6P58173 313 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 PHC1P78364 1004 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 SLC35A1P78382 337 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 HPCAP84074 193 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 IFFO1Q0D2I5 559 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 DPY19L1Q2PZI1 675 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 GPAT3Q53EU6 434 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 C1QTNF12Q5T7M4 302 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 CASP12Q6UXS9 341 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 HMGN2P46Q86SG4 172 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 CMIPQ8IY22 773 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 C17orf78Q8N4C9 275 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 ZNF525Q8N782 197 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 ZNF781Q8N8C0 355 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 WDR31Q8NA23 367 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 C1orf162Q8NEQ5 155 aaPredicted RBP6.31□□□□□ -1.4
UBE4B-208ENST00000475795 VPS37AQ8NEZ2 397 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 OR52E4Q8NGH9 312 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 C10orf105Q8TEF2 133 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 TMEM158Q8WZ71 300 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 FAM168AQ92567 244 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 HTRA1Q92743 480 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 TESCQ96BS2 214 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 ZG16BQ96DA0 208 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 NEURL3Q96EH8 262 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 PPP1R36Q96LQ0 422 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 ROPN1BQ9BZX4 212 aaPredicted RBP6.31□□□□□ -1.4
UBE4B-208ENST00000475795 FKRPQ9H9S5 495 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 ROPN1Q9HAT0 212 aaPredicted RBP6.31□□□□□ -1.4
UBE4B-208ENST00000475795 SLC17A5Q9NRA2 495 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 UPB1Q9UBR1 384 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 OSGIN1Q9UJX0 560 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 AMDHD2Q9Y303 409 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 TMED7Q9Y3B3 224 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 FLVCR1Q9Y5Y0 555 aa6.31□□□□□ -1.4
UBE4B-208ENST00000475795 SVEP1Q4LDE5 3571 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 TMEM72A0PK05 275 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 AGAP5A6NIR3 686 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 CLDN24A6NM45 220 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 HMGN4O00479 90 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 FAAHO00519 579 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 AP3D1O14617 1153 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 PHF1O43189 567 aaPredicted RBP6.3□□□□□ -1.4
UBE4B-208ENST00000475795 CHRM4P08173 479 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 MYZAPP0CAP1 466 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 IMPDH2P12268 514 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 CCNA2P20248 432 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 RPS4Y1P22090 263 aaKnown RBP6.3□□□□□ -1.4
UBE4B-208ENST00000475795 MPGP29372 298 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 APOBEC3AP31941 199 aaPredicted RBP6.3□□□□□ -1.4
UBE4B-208ENST00000475795 CHI3L1P36222 383 aaPredicted RBP6.3□□□□□ -1.4
UBE4B-208ENST00000475795 IDH3AP50213 366 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 POLR2HP52434 150 aaKnown RBP6.3□□□□□ -1.4
UBE4B-208ENST00000475795 MAP2K6P52564 334 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 EFNA4P52798 201 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 CLNS1AP54105 237 aaKnown RBP6.3□□□□□ -1.4
UBE4B-208ENST00000475795 ABCE1P61221 599 aaKnown RBP6.3□□□□□ -1.4
UBE4B-208ENST00000475795 TXNL4AP83876 142 aaKnown RBP6.3□□□□□ -1.4
UBE4B-208ENST00000475795 SLC25A3Q00325 362 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 TGFBR3Q03167 851 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 CHRNB3Q05901 458 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 CASP8Q14790 479 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 SLC17A1Q14916 467 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 CHI3L2Q15782 390 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 OCLNQ16625 522 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 C11orf91Q3C1V1 193 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 SPANXN4Q5MJ08 99 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 TSPO2Q5TGU0 170 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 C9orf135Q5VTT2 229 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 CYB5R2Q6BCY4 276 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 PAQR6Q6TCH4 344 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 LSRQ86X29 649 aaPredicted RBP6.3□□□□□ -1.4
UBE4B-208ENST00000475795 RNF130Q86XS8 419 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 NUDCD3Q8IVD9 361 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 LRRC34Q8IZ02 419 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 ANKFN1Q8N957 763 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 CNOT9Q92600 299 aaKnown RBP6.3□□□□□ -1.4
UBE4B-208ENST00000475795 PROX1Q92786 737 aa6.3□□□□□ -1.4
UBE4B-208ENST00000475795 PMM1Q92871 262 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms