RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 RFLNBQ8N5W9 214 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 OR5W2Q8NH69 310 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 B4GALNT2Q8NHY0 566 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 C9orf43Q8TAL5 461 aaPredicted RBP5.66□□□□□ -1.5
CLK1-210ENST00000473565 KISS1RQ969F8 398 aaPredicted RBP5.66□□□□□ -1.5
CLK1-210ENST00000473565 SLC35B4Q969S0 331 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 CRELD1Q96HD1 420 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 LOXL4Q96JB6 756 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 Q96M85 177 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 TSSK2Q96PF2 358 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 SECISBP2Q96T21 854 aaKnown RBP5.66□□□□□ -1.5
CLK1-210ENST00000473565 NMNAT3Q96T66 252 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 RACGAP1Q9H0H5 632 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 OCEL1Q9H607 264 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 ISG20L2Q9H9L3 353 aaKnown RBP5.66□□□□□ -1.5
CLK1-210ENST00000473565 ZNF160Q9HCG1 818 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 MMP25Q9NPA2 562 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 EXOSC3Q9NQT5 275 aaKnown RBP5.66□□□□□ -1.5
CLK1-210ENST00000473565 NANSQ9NR45 359 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 CMC2Q9NRP2 79 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 FAM86C1Q9NVL1 165 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 ANKRD10Q9NXR5 420 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 KLRF1Q9NZS2 232 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 FOXJ2Q9P0K8 574 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 PCDHGA3Q9Y5H0 932 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 SPIN1Q9Y657 262 aaPredicted RBP5.66□□□□□ -1.5
CLK1-210ENST00000473565 DOCK10Q96BY6 2186 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 AKAP13Q12802 2813 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 GVINP1Q7Z2Y8 2422 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 TMEM72A0PK05 275 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 SMIM30A4D0T7 59 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 RIIAD1A6NNX1 92 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 PRR23D1E9PI22 279 aaPredicted RBP5.66□□□□□ -1.5
CLK1-210ENST00000473565 J3QRK9 145 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 GALR2O43603 387 aaPredicted RBP5.66□□□□□ -1.5
CLK1-210ENST00000473565 JMJD7P0C870 316 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 PRR23D2P0DMB1 279 aaPredicted RBP5.66□□□□□ -1.5
CLK1-210ENST00000473565 COX6A1P12074 109 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 GP1BBP13224 206 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 MYL12AP19105 171 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 HTR1FP30939 366 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 CCKBRP32239 447 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 RAB40BQ12829 278 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 ZSWIM7Q19AV6 140 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 KLHL22Q53GT1 634 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 C3orf38Q5JPI3 329 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 DCAF12Q5T6F0 453 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 LYPD8Q6UX82 237 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 KDM8Q8N371 416 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 OR10H4Q8NGA5 316 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 OR11G2Q8NGC1 345 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 NUBPLQ8TB37 319 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 GPR119Q8TDV5 335 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 HGDQ93099 445 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 ZMYND19Q96E35 227 aaPredicted RBP5.66□□□□□ -1.5
CLK1-210ENST00000473565 ZHX1-C8orf76Q96EF9 292 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 RASL10BQ96S79 203 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 MND1Q9BWT6 205 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 ADAM19Q9H013 955 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 DCSTAMPQ9H295 470 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 PARD6AQ9NPB6 346 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 C19orf25Q9UFG5 118 aaPredicted RBP5.66□□□□□ -1.5
CLK1-210ENST00000473565 CHRNA9Q9UGM1 479 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 PPIEQ9UNP9 301 aaKnown RBP5.66□□□□□ -1.5
CLK1-210ENST00000473565 PCDHGB2Q9Y5G2 931 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 PCSK5Q92824 1860 aa5.66□□□□□ -1.5
CLK1-210ENST00000473565 IGHV1-45A0A0A0MS14 117 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 TMED7-TICAM2A0A0A6YYA0 188 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 TEX13CA0A0J9YWL9 993 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 CCDC182A6NF36 153 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 C12orf71A8MTZ7 269 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 C9orf172C9J069 976 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 C11orf98E9PRG8 122 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 CCRL2O00421 344 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 SUSD5O60279 629 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 ITGA10O75578 1167 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 PNMTP11086 282 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 PEPDP12955 493 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 HK1P19367 917 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 TCN2P20062 427 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 NAA10P41227 235 aaPredicted RBP5.65□□□□□ -1.5
CLK1-210ENST00000473565 TGM4P49221 684 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 P2RX1P51575 399 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.65□□□□□ -1.5
CLK1-210ENST00000473565 CBFBQ13951 182 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 INSL4Q14641 139 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 ANKDD1AQ495B1 522 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 IL20RBQ6UXL0 311 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 MEPCEQ7L2J0 689 aaKnown RBP5.65□□□□□ -1.5
CLK1-210ENST00000473565 BTLAQ7Z6A9 289 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 BPHLQ86WA6 291 aaPredicted RBP5.65□□□□□ -1.5
CLK1-210ENST00000473565 ADGRG3Q86Y34 549 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 SUMF1Q8NBK3 374 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 C17orf47Q8NEP4 570 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 PROKR2Q8NFJ6 384 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 OR2Y1Q8NGV0 311 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 DYNC2LI1Q8TCX1 351 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 CT55Q8WUE5 264 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 ZFAND2BQ8WV99 257 aa5.65□□□□□ -1.5
CLK1-210ENST00000473565 RFKQ969G6 155 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms