RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 OR52E4Q8NGH9 312 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 OR6T1Q8NGN1 323 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 ABHD3Q8WU67 409 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 POM121Q96HA1 1249 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 OR5B2Q96R09 309 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 TM9SF2Q99805 663 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 ENKD1Q9H0I2 346 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 EVA1AQ9H8M9 152 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 GORASP2Q9H8Y8 452 aa11.71□□□□□ -0.53
TPM3-216ENST00000473036 ZNF629Q9UEG4 869 aaPredicted RBP11.71□□□□□ -0.53
TPM3-216ENST00000473036 PRR14LQ5THK1 2151 aa11.71□□□□□ -0.54
TPM3-216ENST00000473036 ANKHD1Q8IWZ3 2542 aaKnown RBP11.7□□□□□ -0.54
TPM3-216ENST00000473036 IGKV1D-42A0A075B6H8 117 aa11.7□□□□□ -0.54
TPM3-216ENST00000473036 A0A1B0GWA3 101 aa11.7□□□□□ -0.54
TPM3-216ENST00000473036 PRORSD1PA6NEY8 169 aa11.7□□□□□ -0.54
TPM3-216ENST00000473036 SMAD9O15198 467 aaKnown RBP11.7□□□□□ -0.54
TPM3-216ENST00000473036 NPIPB7O75200 414 aa11.7□□□□□ -0.54
TPM3-216ENST00000473036 IL18BPO95998 194 aa11.7□□□□□ -0.54
TPM3-216ENST00000473036 FESP07332 822 aa11.7□□□□□ -0.54
TPM3-216ENST00000473036 FUT4P22083 530 aa11.7□□□□□ -0.54
TPM3-216ENST00000473036 DIO1P49895 249 aa11.7□□□□□ -0.54
TPM3-216ENST00000473036 SNTB1Q13884 538 aaKnown RBP11.7□□□□□ -0.54
TPM3-216ENST00000473036 SF3B4Q15427 424 aaKnown RBP eCLIP11.7□□□□□ -0.54
TPM3-216ENST00000473036 FXNQ16595 210 aa11.7□□□□□ -0.54
TPM3-216ENST00000473036 TMPPEQ6ZT21 453 aa11.7□□□□□ -0.54
TPM3-216ENST00000473036 P4HA3Q7Z4N8 544 aa11.7□□□□□ -0.54
TPM3-216ENST00000473036 LSMEM1Q8N8F7 131 aa11.7□□□□□ -0.54
TPM3-216ENST00000473036 RNF128Q8TEB7 428 aa11.7□□□□□ -0.54
TPM3-216ENST00000473036 LRGUKQ96M69 825 aa11.7□□□□□ -0.54
TPM3-216ENST00000473036 ACTR3BQ9P1U1 418 aa11.7□□□□□ -0.54
TPM3-216ENST00000473036 SNX13Q9Y5W8 968 aa11.7□□□□□ -0.54
TPM3-216ENST00000473036 ZNF469Q96JG9 3925 aaPredicted RBP11.7□□□□□ -0.54
TPM3-216ENST00000473036 FAM221AA4D161 298 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 SYT5O00445 386 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 ZNF208O43345 1280 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 NQO1P15559 274 aaKnown RBP11.69□□□□□ -0.54
TPM3-216ENST00000473036 EDNRAP25101 427 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 SLC7A1P30825 629 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 KDELR2P33947 212 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 NTF4P34130 210 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 HTR3AP46098 478 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 RAC3P60763 192 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 CEACAM7Q14002 265 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 OR1Q1Q15612 314 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 SLC25A35Q3KQZ1 300 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 PPP4R4Q6NUP7 873 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 WDR88Q6ZMY6 472 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 CHMP1BQ7LBR1 199 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 DHFR2Q86XF0 187 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 P3H2Q8IVL5 708 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 RNF148Q8N7C7 305 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 FAM156AQ8NDB6 213 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 SLC26A7Q8TE54 656 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 LZICQ8WZA0 190 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 PTDSS2Q9BVG9 487 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 SFXN3Q9BWM7 321 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 KCNJ16Q9NPI9 418 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 ADPRHL2Q9NX46 363 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 STOML1Q9UBI4 398 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 RPS6KA6Q9UK32 745 aa11.69□□□□□ -0.54
TPM3-216ENST00000473036 A0A0B4J2E0 115 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 A0A1B0GX12 115 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 GJE1A6NN92 205 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 DVL2O14641 736 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 SS18L1O75177 396 aaPredicted RBP11.68□□□□□ -0.54
TPM3-216ENST00000473036 C8BP07358 591 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 NCK1P16333 377 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 PTNP21246 168 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 OPRM1P35372 400 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 CDH12P55289 794 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 RGS8P57771 180 aaPredicted RBP11.68□□□□□ -0.54
TPM3-216ENST00000473036 SIRPAP78324 504 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 H3F3AP84243 136 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 TLE4Q04727 773 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 FBXL19-AS1Q494R0 122 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 CYBRD1Q53TN4 286 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 GLYATQ6IB77 296 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 ZNF474Q6S9Z5 364 aaPredicted RBP11.68□□□□□ -0.54
TPM3-216ENST00000473036 FCRLAQ7L513 359 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 CCDC103Q8IW40 242 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 CNEP1R1Q8N9A8 125 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 VANGL1Q8TAA9 524 aaPredicted RBP11.68□□□□□ -0.54
TPM3-216ENST00000473036 SLC25A43Q8WUT9 341 aaPredicted RBP11.68□□□□□ -0.54
TPM3-216ENST00000473036 CPNE4Q96A23 557 aaPredicted RBP11.68□□□□□ -0.54
TPM3-216ENST00000473036 ZFP3Q96NJ6 502 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 PSD2Q9BQI7 771 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 OPN3Q9H1Y3 402 aaPredicted RBP11.68□□□□□ -0.54
TPM3-216ENST00000473036 SLC24A3Q9HC58 644 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 SERINC1Q9NRX5 453 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 PAQR5Q9NXK6 330 aaPredicted RBP11.68□□□□□ -0.54
TPM3-216ENST00000473036 MCTS1Q9ULC4 181 aaKnown RBP11.68□□□□□ -0.54
TPM3-216ENST00000473036 SAMD4AQ9UPU9 718 aaKnown RBP11.68□□□□□ -0.54
TPM3-216ENST00000473036 HDGFL3Q9Y3E1 203 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 ALPK2Q86TB3 2170 aa11.68□□□□□ -0.54
TPM3-216ENST00000473036 LIPT2A6NK58 231 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 AQP12BA6NM10 295 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 ZNF716A6NP11 495 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 A8MXE2 369 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 FTCDNL1E5RQL4 147 aa11.67□□□□□ -0.54
TPM3-216ENST00000473036 SULT2B1O00204 365 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms