RNA–Protein interactions for RNA: ENST00000472638.1

UBQLN4-203, Transcript of ubiquilin 4, humanhuman

TSL 5

Gene UBQLN4, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-203ENST00000472638 KLK2P20151 261 aa17.7■□□□□ 0.42
UBQLN4-203ENST00000472638 CCNA2P20248 432 aa17.7■□□□□ 0.42
UBQLN4-203ENST00000472638 TMEM201Q5SNT2 666 aa17.7■□□□□ 0.42
UBQLN4-203ENST00000472638 LCN8Q6JVE9 175 aa17.7■□□□□ 0.42
UBQLN4-203ENST00000472638 CCDC80Q76M96 950 aa17.7■□□□□ 0.42
UBQLN4-203ENST00000472638 NUFIP2Q7Z417 695 aaKnown RBP17.7■□□□□ 0.42
UBQLN4-203ENST00000472638 TUSC5Q8IXB3 177 aa17.7■□□□□ 0.42
UBQLN4-203ENST00000472638 OR52E4Q8NGH9 312 aa17.7■□□□□ 0.42
UBQLN4-203ENST00000472638 WDR60Q8WVS4 1066 aa17.7■□□□□ 0.42
UBQLN4-203ENST00000472638 PCDHAC1Q9H158 963 aa17.7■□□□□ 0.42
UBQLN4-203ENST00000472638 MTHFD2LQ9H903 347 aaPredicted RBP17.7■□□□□ 0.42
UBQLN4-203ENST00000472638 CTPS2Q9NRF8 586 aa17.7■□□□□ 0.42
UBQLN4-203ENST00000472638 EGFL7Q9UHF1 273 aa17.7■□□□□ 0.42
UBQLN4-203ENST00000472638 AKAP9Q99996 3911 aa17.7■□□□□ 0.42
UBQLN4-203ENST00000472638 DSPPQ9NZW4 1301 aa17.7■□□□□ 0.42
UBQLN4-203ENST00000472638 HRNRQ86YZ3 2850 aaPredicted RBP17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 MPDZO75970 2070 aa17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 A0A0G2JPF8 293 aa17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 A0A1W2PPR1 153 aa17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 HNRNPCL2B2RXH8 293 aa17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 HNRNPCL3B7ZW38 293 aa17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 ACOT8O14734 319 aa17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 PRKD3O94806 890 aa17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 PGM3O95394 542 aa17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 HNRNPCL4P0DMR1 293 aa17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 IL7RP16871 459 aa17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 IDH2P48735 452 aaKnown RBP17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 PCYT1AP49585 367 aa17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 RNPS1Q15287 305 aaKnown RBP17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 MTX3Q5HYI7 312 aa17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 RPS26P11Q5JNZ5 115 aaPredicted RBP17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 C22orf34Q6ZV56 151 aa17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 PATL1Q86TB9 770 aaKnown RBP17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 PMM1Q92871 262 aa17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 TRIM15Q9C019 465 aa17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 GORASP2Q9H8Y8 452 aa17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 EXOSC3Q9NQT5 275 aaKnown RBP17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 ZNF226Q9NYT6 803 aa17.69■□□□□ 0.42
UBQLN4-203ENST00000472638 ANKRD65E5RJM6 399 aa17.68■□□□□ 0.42
UBQLN4-203ENST00000472638 ETS2P15036 469 aa17.68■□□□□ 0.42
UBQLN4-203ENST00000472638 DNASE1P24855 282 aa17.68■□□□□ 0.42
UBQLN4-203ENST00000472638 MSX2P35548 267 aaPredicted RBP17.68■□□□□ 0.42
UBQLN4-203ENST00000472638 RAC3P60763 192 aa17.68■□□□□ 0.42
UBQLN4-203ENST00000472638 MS4A2Q01362 244 aa17.68■□□□□ 0.42
UBQLN4-203ENST00000472638 FLOT2Q14254 428 aa17.68■□□□□ 0.42
UBQLN4-203ENST00000472638 MRPL2Q5T653 305 aaKnown RBP17.68■□□□□ 0.42
UBQLN4-203ENST00000472638 C1orf146Q5VVC0 180 aa17.68■□□□□ 0.42
UBQLN4-203ENST00000472638 GLYATQ6IB77 296 aa17.68■□□□□ 0.42
UBQLN4-203ENST00000472638 STK32CQ86UX6 486 aa17.68■□□□□ 0.42
UBQLN4-203ENST00000472638 DHFR2Q86XF0 187 aa17.68■□□□□ 0.42
UBQLN4-203ENST00000472638 VRK2Q86Y07 508 aa17.68■□□□□ 0.42
UBQLN4-203ENST00000472638 NINJ1Q92982 152 aa17.68■□□□□ 0.42
UBQLN4-203ENST00000472638 ZNF775Q96BV0 537 aaPredicted RBP17.68■□□□□ 0.42
UBQLN4-203ENST00000472638 PIK3IP1Q96FE7 263 aa17.68■□□□□ 0.42
UBQLN4-203ENST00000472638 PLEKHF2Q9H8W4 249 aa17.68■□□□□ 0.42
UBQLN4-203ENST00000472638 KLHL13Q9P2N7 655 aa17.68■□□□□ 0.42
UBQLN4-203ENST00000472638 SMAD9O15198 467 aaKnown RBP17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 SIAH2O43255 324 aa17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 GOSR1O95249 250 aa17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 DBIP07108 87 aaKnown RBP17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 ATP6V1B2P21281 511 aa17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 RPS4Y1P22090 263 aaKnown RBP17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 KDELR2P33947 212 aa17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 APOBEC1P41238 236 aaKnown RBP17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 DIO1P49895 249 aa17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 SYT14P1Q58G82 188 aa17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 PAMR1Q6UXH9 720 aa17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 STAC2Q6ZMT1 411 aa17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 BEND4Q6ZU67 534 aa17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 GRINAQ7Z429 371 aa17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 KRT73Q86Y46 540 aa17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 CMIPQ8IY22 773 aa17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 PEX5LQ8IYB4 626 aa17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 OR52P1PQ8NH57 321 aa17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 POP5Q969H6 163 aaKnown RBP17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 FAM162AQ96A26 154 aa17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 NSMCE2Q96MF7 247 aa17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 ZNF607Q96SK3 696 aa17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 OR11A1Q9GZK7 315 aa17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 RLIMQ9NVW2 624 aa17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 CHRNA9Q9UGM1 479 aa17.67■□□□□ 0.42
UBQLN4-203ENST00000472638 HEATR5AQ86XA9 2040 aa17.66■□□□□ 0.42
UBQLN4-203ENST00000472638 DEFB108AA8MXU0 73 aa17.66■□□□□ 0.42
UBQLN4-203ENST00000472638 SULT2B1O00204 365 aa17.66■□□□□ 0.42
UBQLN4-203ENST00000472638 GCM2O75603 506 aaPredicted RBP17.66■□□□□ 0.42
UBQLN4-203ENST00000472638 FESP07332 822 aa17.66■□□□□ 0.42
UBQLN4-203ENST00000472638 YES1P07947 543 aa17.66■□□□□ 0.42
UBQLN4-203ENST00000472638 NCK1P16333 377 aa17.66■□□□□ 0.42
UBQLN4-203ENST00000472638 CRYGSP22914 178 aa17.66■□□□□ 0.42
UBQLN4-203ENST00000472638 RASGEF1BQ0VAM2 473 aa17.66■□□□□ 0.42
UBQLN4-203ENST00000472638 SPNS3Q6ZMD2 512 aa17.66■□□□□ 0.42
UBQLN4-203ENST00000472638 ZNF836Q6ZNA1 936 aa17.66■□□□□ 0.42
UBQLN4-203ENST00000472638 TMPPEQ6ZT21 453 aa17.66■□□□□ 0.42
UBQLN4-203ENST00000472638 ADGRG3Q86Y34 549 aa17.66■□□□□ 0.42
UBQLN4-203ENST00000472638 SLC43A2Q8N370 569 aa17.66■□□□□ 0.42
UBQLN4-203ENST00000472638 SLC25A43Q8WUT9 341 aaPredicted RBP17.66■□□□□ 0.42
UBQLN4-203ENST00000472638 ARL5BQ96KC2 179 aa17.66■□□□□ 0.42
UBQLN4-203ENST00000472638 SPATA5L1Q9BVQ7 753 aa17.66■□□□□ 0.42
UBQLN4-203ENST00000472638 EDARQ9UNE0 448 aa17.66■□□□□ 0.42
UBQLN4-203ENST00000472638 SPIN1Q9Y657 262 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms