RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 ANXA4P09525 319 aaPredicted RBP3.1□□□□□ -1.91
XRN1-209ENST00000472625 DHRS4L1P0CG22 281 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 PRPS2P11908 318 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 UQCRBP14927 111 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 GGT1P19440 569 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 ATP5F1P24539 256 aaPredicted RBP3.1□□□□□ -1.91
XRN1-209ENST00000472625 PTAFRP25105 342 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 LIPAP38571 399 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 MAGEA12P43365 314 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 ASMTP46597 345 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 PRIM2P49643 509 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 STARP49675 285 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 GAS1P54826 345 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 UCP3P55916 312 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 CARD18P57730 90 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 B3GALT5-AS1P59052 145 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 CSNK2A1P68400 391 aaPredicted RBP3.1□□□□□ -1.91
XRN1-209ENST00000472625 VLDLRP98155 873 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 PSG6Q00889 435 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 TGFBR3Q03167 851 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 CHRNB3Q05901 458 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 LOXL1Q08397 574 aaPredicted RBP3.1□□□□□ -1.91
XRN1-209ENST00000472625 DLG1Q12959 904 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 ITGADQ13349 1161 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 TNK1Q13470 666 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 CAPRIN1Q14444 709 aaKnown RBP3.1□□□□□ -1.91
XRN1-209ENST00000472625 SQLEQ14534 574 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 PPA1Q15181 289 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 ZNF239Q16600 458 aaKnown RBP3.1□□□□□ -1.91
XRN1-209ENST00000472625 ZNF672Q499Z4 452 aaPredicted RBP3.1□□□□□ -1.91
XRN1-209ENST00000472625 GLE1Q53GS7 698 aaKnown RBP3.1□□□□□ -1.91
XRN1-209ENST00000472625 TRMT12Q53H54 448 aaKnown RBP3.1□□□□□ -1.91
XRN1-209ENST00000472625 SGO1Q5FBB7 561 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 ARL13AQ5H913 290 aaPredicted RBP3.1□□□□□ -1.91
XRN1-209ENST00000472625 KHDC1LQ5JSQ8 128 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 SH2D4BQ5SQS7 431 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 TIMM23BQ5SRD1 257 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 C6orf52Q5T4I8 152 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 CPTPQ5TA50 214 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 LIPNQ5VXI9 398 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 HBMQ6B0K9 141 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 OR5M10Q6IEU7 315 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 OR7E24Q6IFN5 339 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 ZNF544Q6NX49 715 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 C8orf74Q6P047 294 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 C3orf33Q6P1S2 294 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 TMEM107Q6UX40 140 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 LRIG3Q6UXM1 1119 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 TFAP2EQ6VUC0 442 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 NPSR1Q6W5P4 371 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 Q6ZT83 130 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 ZNF550Q7Z398 422 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 R3HCC1LQ7Z5L2 792 aaKnown RBP3.1□□□□□ -1.91
XRN1-209ENST00000472625 GALNT10Q86SR1 603 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 DTX2Q86UW9 622 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 TRABD2AQ86V40 505 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 CIARTQ8N365 385 aaPredicted RBP3.1□□□□□ -1.91
XRN1-209ENST00000472625 C17orf78Q8N4C9 275 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 COX18Q8N8Q8 333 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 SPATA4Q8NEY3 305 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 TOR1AIP2Q8NFQ8 470 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 FBXO25Q8TCJ0 367 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 GPR151Q8TDV0 419 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 ACMSDQ8TDX5 336 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 IGFBPL1Q8WX77 278 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 FIG4Q92562 907 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 DPF1Q92782 380 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 PROX1Q92786 737 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 EXOSC8Q96B26 276 aaKnown RBP3.1□□□□□ -1.91
XRN1-209ENST00000472625 S100PBPQ96BU1 408 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 MOAP1Q96BY2 351 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 TM4SF18Q96CE8 201 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 MTERF3Q96E29 417 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 ZMYND19Q96E35 227 aaPredicted RBP3.1□□□□□ -1.91
XRN1-209ENST00000472625 KLHL15Q96M94 604 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 STACQ99469 402 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 CCT7Q99832 543 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 LMF2Q9BU23 707 aaKnown RBP3.1□□□□□ -1.91
XRN1-209ENST00000472625 BEX2Q9BXY8 128 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 FUT8Q9BYC5 575 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 SLCO5A1Q9H2Y9 848 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 FKRPQ9H9S5 495 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 PPCSQ9HAB8 311 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 MYNNQ9NPC7 610 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 UBQLN4Q9NRR5 601 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 DUSP22Q9NRW4 184 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 ATAD3AQ9NVI7 634 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 GIN1Q9NXP7 522 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 TAS2R7Q9NYW3 318 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 RNF7Q9UBF6 113 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 HEY2Q9UBP5 337 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 POU2F3Q9UKI9 436 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 KCNS2Q9ULS6 477 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 VDAC3Q9Y277 283 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 ZNF337Q9Y3M9 751 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.1□□□□□ -1.91
XRN1-209ENST00000472625 FBN1P35555 2871 aaKnown RBP3.1□□□□□ -1.91
XRN1-209ENST00000472625 TLN2Q9Y4G6 2542 aa3.09□□□□□ -1.91
XRN1-209ENST00000472625 A0A087WUV0 522 aaPredicted RBP3.09□□□□□ -1.91
XRN1-209ENST00000472625 GOLGA8QA0A0J9YX86 632 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms