RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 CNN3Q15417 329 aaKnown RBP12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 NADSYN1Q6IA69 706 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TMPRSS11FQ6ZWK6 438 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 C4orf36Q96KX1 117 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 NUPL2O15504 423 aaKnown RBP12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CDK1P06493 297 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 LMNTD1Q8N9Z9 388 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 VN1R3Q9BXE9 311 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SHARPINQ9H0F6 387 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SLC45A1Q9Y2W3 748 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 DENRO43583 198 aaKnown RBP12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 JRKO75564 520 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 MPC1LP0DKB6 136 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 NDUFB7P17568 137 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 MAOAP21397 527 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 LSMEM2Q8N112 164 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ACOT4Q8N9L9 421 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 OR8J2Q8NGG1 315 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 OR52E1Q8NGJ3 308 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 DTD1Q8TEA8 209 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 FZD9O00144 591 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 HNRNPFP52597 415 aaKnown RBP12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 DEFB103AP81534 67 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SOX4Q06945 474 aaPredicted RBP12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 DBPQ10586 325 aaPredicted RBP12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 DPY19L2P1Q6NXN4 242 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CAMKMTQ7Z624 323 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 FAM109AQ8N4B1 249 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ADAMTS18Q8TE60 1221 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 PMS2P1A4D2B8 440 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 GABRA5P31644 462 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 MTCP1P56278 107 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TSSK4Q6SA08 328 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 GTF2H5Q6ZYL4 71 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ABCA7Q8IZY2 2146 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SUMF2Q8NBJ7 301 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 BEST4Q8NFU0 473 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 HPSE2Q8WWQ2 592 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CORO2AQ92828 525 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 MFRPQ9BY79 579 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 PLSCR3Q9NRY6 295 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SLC6A5Q9Y345 797 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 KIDINS220Q9ULH0 1771 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SLC6A8P48029 635 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 NLRC3Q7RTR2 1065 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 M1APQ8TC57 530 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ASB11Q8WXH4 323 aa12.39□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 PRSS38A1L453 326 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 BHLHE40O14503 412 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ACPPP15309 386 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 PKLRP30613 574 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CLDN17P56750 224 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SLC9A3R2Q15599 337 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SBSNQ6UWP8 590 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 GPR148Q8TDV2 347 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SHISA7A6NL88 538 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 NXPH2O95156 264 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 S1PR4O95977 384 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 AHRP35869 848 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 C16orf70Q9BSU1 422 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ZDHHC18Q9NUE0 388 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 PCDHA9Q9Y5H5 950 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 AREGP15514 252 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 PSMB5P28074 263 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 HOXA11P31270 313 aaPredicted RBP12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 IRF4Q15306 451 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 NEIL2Q969S2 332 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CNTNAP3BQ96NU0 1288 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 UBL7Q96S82 380 aaPredicted RBP12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ATG4BQ9Y4P1 393 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 NPIPB15A6NHN6 443 aaPredicted RBP12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 NUDT19A8MXV4 375 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 F6UZH7 168 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 RFXAPO00287 272 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SMAD6O43541 496 aaKnown RBP12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 LY86O95711 162 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 TAS2R60P59551 318 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 C10orf62Q5T681 223 aaPredicted RBP12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 AKR1E2Q96JD6 320 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ARHGEF28Q8N1W1 1705 aaKnown RBP12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 IGHG1P01857 330 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SLC35E2BP0CK96 405 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 DCCP43146 1447 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 AMTP48728 403 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ERVPABLB-1P60509 514 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 RAC1P63000 192 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SH3BP2P78314 561 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 C6orf89Q6UWU4 347 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 SLC35D2Q76EJ3 337 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ADIPOR2Q86V24 386 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 CHDHQ8NE62 594 aaPredicted RBP12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 DUSP19Q8WTR2 217 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ZUFSPQ96AP4 578 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 EMC9Q9Y3B6 208 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 A6NIZ1 184 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 RAP1BP61224 184 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 RAP1AP62834 184 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 HIST2H3PS2Q5TEC6 136 aa12.38□□□□□ -0.43
NPHP3-ACAD11-201ENST00000471702 RPL7L1Q6DKI1 246 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms