RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 ACVR2AP27037 513 aa15.91■□□□□ 0.14
HSPG2-208ENST00000471322 TMED10P49755 219 aaKnown RBP15.91■□□□□ 0.14
HSPG2-208ENST00000471322 GP2P55259 537 aaKnown RBP15.91■□□□□ 0.14
HSPG2-208ENST00000471322 CRYZQ08257 329 aaKnown RBP15.91■□□□□ 0.14
HSPG2-208ENST00000471322 IRF3Q14653 427 aa15.91■□□□□ 0.14
HSPG2-208ENST00000471322 EXT1Q16394 746 aa15.91■□□□□ 0.14
HSPG2-208ENST00000471322 SOWAHCQ53LP3 525 aaPredicted RBP15.91■□□□□ 0.14
HSPG2-208ENST00000471322 RNLSQ5VYX0 342 aa15.91■□□□□ 0.14
HSPG2-208ENST00000471322 SLC30A6Q6NXT4 461 aa15.91■□□□□ 0.14
HSPG2-208ENST00000471322 NUP54Q7Z3B4 507 aa15.91■□□□□ 0.14
HSPG2-208ENST00000471322 MARCH3Q86UD3 253 aa15.91■□□□□ 0.14
HSPG2-208ENST00000471322 OR4Q3Q8NH05 313 aa15.91■□□□□ 0.14
HSPG2-208ENST00000471322 OR5W2Q8NH69 310 aa15.91■□□□□ 0.14
HSPG2-208ENST00000471322 ZNF563Q8TA94 476 aa15.91■□□□□ 0.14
HSPG2-208ENST00000471322 SLC39A7Q92504 469 aa15.91■□□□□ 0.14
HSPG2-208ENST00000471322 TMEM80Q96HE8 168 aa15.91■□□□□ 0.14
HSPG2-208ENST00000471322 FER1L6-AS2Q96M78 137 aa15.91■□□□□ 0.14
HSPG2-208ENST00000471322 IP6K3Q96PC2 410 aa15.91■□□□□ 0.14
HSPG2-208ENST00000471322 ZNF700Q9H0M5 742 aa15.91■□□□□ 0.14
HSPG2-208ENST00000471322 ZBTB20Q9HC78 741 aaPredicted RBP15.91■□□□□ 0.14
HSPG2-208ENST00000471322 RYDENQ9NUL5 291 aaKnown RBP15.91■□□□□ 0.14
HSPG2-208ENST00000471322 MRPS18AQ9NVS2 196 aaKnown RBP15.91■□□□□ 0.14
HSPG2-208ENST00000471322 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.91■□□□□ 0.14
HSPG2-208ENST00000471322 ENO4A6NNW6 628 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 KDM4EB2RXH2 506 aaPredicted RBP15.9■□□□□ 0.14
HSPG2-208ENST00000471322 ATXN7O15265 892 aaPredicted RBP15.9■□□□□ 0.14
HSPG2-208ENST00000471322 OIP5O43482 229 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 CELA2AP08217 269 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 DBTP11182 482 aaKnown RBP15.9■□□□□ 0.14
HSPG2-208ENST00000471322 COX6A1P12074 109 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 PSMB9P28065 219 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 RRADP55042 308 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 ZNF91Q05481 1191 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 CBLN3Q6UW01 205 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 ATG4DQ86TL0 474 aaPredicted RBP15.9■□□□□ 0.14
HSPG2-208ENST00000471322 ANKRD13BQ86YJ7 626 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 LNX2Q8N448 690 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 SLC15A4Q8N697 577 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 FDCSPQ8NFU4 85 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 C12orf43Q96C57 262 aaKnown RBP15.9■□□□□ 0.14
HSPG2-208ENST00000471322 ARSGQ96EG1 525 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 ITGA3P26006 1051 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 SLC6A6P31641 620 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 ZNF117Q03924 483 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 Q0VFX4 171 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 CBFBQ13951 182 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 ANKK1Q8NFD2 765 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 OR13C2Q8NGS9 318 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 SLC22A8Q8TCC7 542 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 NACC2Q96BF6 587 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 DEFB126Q9BYW3 111 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 ADAM19Q9H013 955 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 FN3KQ9H479 309 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 LIN28AQ9H9Z2 209 aaKnown RBP15.9■□□□□ 0.14
HSPG2-208ENST00000471322 H2AFY2Q9P0M6 372 aaPredicted RBP15.9■□□□□ 0.14
HSPG2-208ENST00000471322 MYOTQ9UBF9 498 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 PCDHGB6Q9Y5F9 930 aa15.9■□□□□ 0.14
HSPG2-208ENST00000471322 IGHV1-45A0A0A0MS14 117 aa15.89■□□□□ 0.13
HSPG2-208ENST00000471322 NSG1A0A0A6YYJ2 146 aa15.89■□□□□ 0.13
HSPG2-208ENST00000471322 H3BMQ9 156 aa15.89■□□□□ 0.13
HSPG2-208ENST00000471322 MKRN2OSH3BPM6 223 aa15.89■□□□□ 0.13
HSPG2-208ENST00000471322 BHLHE40O14503 412 aa15.89■□□□□ 0.13
HSPG2-208ENST00000471322 CDC40O60508 579 aaKnown RBP eCLIP15.89■□□□□ 0.13
HSPG2-208ENST00000471322 PDGFAP04085 211 aa15.89■□□□□ 0.13
HSPG2-208ENST00000471322 PTNP21246 168 aa15.89■□□□□ 0.13
HSPG2-208ENST00000471322 P2RX1P51575 399 aa15.89■□□□□ 0.13
HSPG2-208ENST00000471322 RAB40BQ12829 278 aa15.89■□□□□ 0.13
HSPG2-208ENST00000471322 PCOLCEQ15113 449 aa15.89■□□□□ 0.13
HSPG2-208ENST00000471322 ZNF367Q7RTV3 350 aa15.89■□□□□ 0.13
HSPG2-208ENST00000471322 GALNT16Q8N428 558 aa15.89■□□□□ 0.13
HSPG2-208ENST00000471322 M1APQ8TC57 530 aa15.89■□□□□ 0.13
HSPG2-208ENST00000471322 ELP5Q8TE02 316 aa15.89■□□□□ 0.13
HSPG2-208ENST00000471322 SH3YL1Q96HL8 342 aaPredicted RBP15.89■□□□□ 0.13
HSPG2-208ENST00000471322 COG8Q96MW5 612 aa15.89■□□□□ 0.13
HSPG2-208ENST00000471322 IFT27Q9BW83 186 aa15.89■□□□□ 0.13
HSPG2-208ENST00000471322 FUNDC2Q9BWH2 189 aa15.89■□□□□ 0.13
HSPG2-208ENST00000471322 RACGAP1Q9H0H5 632 aa15.89■□□□□ 0.13
HSPG2-208ENST00000471322 TP53TG5Q9Y2B4 290 aa15.89■□□□□ 0.13
HSPG2-208ENST00000471322 ZNF337Q9Y3M9 751 aa15.89■□□□□ 0.13
HSPG2-208ENST00000471322 TRIM64BA6NI03 449 aa15.88■□□□□ 0.13
HSPG2-208ENST00000471322 TMEM200CA6NKL6 621 aa15.88■□□□□ 0.13
HSPG2-208ENST00000471322 WWP2O00308 870 aa15.88■□□□□ 0.13
HSPG2-208ENST00000471322 MAN1A2O60476 641 aa15.88■□□□□ 0.13
HSPG2-208ENST00000471322 NADKO95544 446 aaPredicted RBP15.88■□□□□ 0.13
HSPG2-208ENST00000471322 CH25HO95992 272 aa15.88■□□□□ 0.13
HSPG2-208ENST00000471322 GP1BBP13224 206 aa15.88■□□□□ 0.13
HSPG2-208ENST00000471322 CCNA2P20248 432 aa15.88■□□□□ 0.13
HSPG2-208ENST00000471322 FXYD6P3P58550 94 aa15.88■□□□□ 0.13
HSPG2-208ENST00000471322 C17orf67Q0P5P2 114 aa15.88■□□□□ 0.13
HSPG2-208ENST00000471322 LSAMPQ13449 338 aa15.88■□□□□ 0.13
HSPG2-208ENST00000471322 AADACL4Q5VUY2 407 aa15.88■□□□□ 0.13
HSPG2-208ENST00000471322 NXNL2Q5VZ03 156 aa15.88■□□□□ 0.13
HSPG2-208ENST00000471322 DESI1Q6ICB0 168 aa15.88■□□□□ 0.13
HSPG2-208ENST00000471322 NDUFAF7Q7L592 441 aa15.88■□□□□ 0.13
HSPG2-208ENST00000471322 OR51A7Q8NH64 312 aa15.88■□□□□ 0.13
HSPG2-208ENST00000471322 B4GALNT2Q8NHY0 566 aa15.88■□□□□ 0.13
HSPG2-208ENST00000471322 THAP3Q8WTV1 239 aaPredicted RBP15.88■□□□□ 0.13
HSPG2-208ENST00000471322 LIPHQ8WWY8 451 aa15.88■□□□□ 0.13
HSPG2-208ENST00000471322 TNFRSF13CQ96RJ3 184 aa15.88■□□□□ 0.13
HSPG2-208ENST00000471322 ENPP5Q9UJA9 477 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms