RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 KIAA1456Q9P272 454 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 OARD1Q9Y530 152 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 OR5K4A6NMS3 321 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 KIAA1324LA8MWY0 1029 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-210ENST00000471181 RNASEK-C17orf49H0YIS7 233 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 ZNF701M0R085 212 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-210ENST00000471181 MRPL33O75394 65 aaKnown RBP6.46□□□□□ -1.38
BRCA1-210ENST00000471181 APBB3O95704 486 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 ADH4P08319 380 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 FUT1P19526 365 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 GABRA5P31644 462 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 HLCSP50747 726 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 STC1P52823 247 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 DIO3P55073 304 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 PCBD1P61457 104 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 SMUG1Q53HV7 270 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 LY6G5CQ5SRR4 150 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 C6orf132Q5T0Z8 1188 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 TMEM268Q5VZI3 342 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 MFSD12Q6NUT3 480 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 FIGLAQ6QHK4 219 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 ZNF813Q6ZN06 617 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 Q6ZRG5 221 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 ZFAND4Q86XD8 727 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 GLB1L2Q8IW92 636 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 C2CD4CQ8TF44 421 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 TLCD1Q96CP7 247 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 ZBED3Q96IU2 234 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-210ENST00000471181 SLC35E1Q96K37 410 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 NSUN5Q96P11 429 aaKnown RBP6.46□□□□□ -1.38
BRCA1-210ENST00000471181 VN1R3Q9BXE9 311 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 ALOXE3Q9BYJ1 711 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 C12orf10Q9HB07 376 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 SLC2A9Q9NRM0 540 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 PIGVQ9NUD9 493 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 SUSD2Q9UGT4 822 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 DUSP13Q9UII6 198 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 NPTNQ9Y639 398 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 M0QZ24 198 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 MAN2B1O00754 1011 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 EFSO43281 561 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 PEX10O60683 326 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 PPP3CBP16298 524 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 MAOBP27338 520 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 ATP4BP51164 291 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 KRTDAPP60985 99 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 DBPQ10586 325 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-210ENST00000471181 ZNF805Q5CZA5 627 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 SOHLH1Q5JUK2 328 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 PIP5KL1Q5T9C9 394 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 ZNF626Q68DY1 528 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 Q6ZVL8 140 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 PGAP1Q75T13 922 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 LRRTM1Q86UE6 522 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 CNTN4Q8IWV2 1026 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 ZDHHC14Q8IZN3 488 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 NIPA2Q8N8Q9 360 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 LMNTD1Q8N9Z9 388 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 PINX1Q96BK5 328 aaKnown RBP6.46□□□□□ -1.38
BRCA1-210ENST00000471181 SEC22AQ96IW7 307 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 C4orf36Q96KX1 117 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 FCRL3Q96P31 734 aaPredicted RBP6.46□□□□□ -1.38
BRCA1-210ENST00000471181 OR2M2Q96R28 347 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 MBOAT4Q96T53 435 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 GPR62Q9BZJ7 368 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 ANKRD19PQ9H560 264 aa6.46□□□□□ -1.38
BRCA1-210ENST00000471181 C5orf52A6NGY3 159 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 SGK494L7N484 410 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 P2RX6O15547 441 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 JRKO75564 520 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 TOX4O94842 621 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 NXPH2O95156 264 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 GSRP00390 522 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 ZNF888P0CJ79 500 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-210ENST00000471181 NDUFB7P17568 137 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 CNR1P21554 472 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 ACRV1P26436 265 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 CDK5Q00535 292 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 ARHGAP1Q07960 439 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 PRR27Q6MZM9 219 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 C15orf52Q6ZUT6 534 aaKnown RBP6.45□□□□□ -1.38
BRCA1-210ENST00000471181 SYT13Q7L8C5 426 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 LRRC28Q86X40 367 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-210ENST00000471181 TMEM239Q8WW34 195 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 SOX7Q9BT81 388 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 MTHFD2LQ9H903 347 aaPredicted RBP6.45□□□□□ -1.38
BRCA1-210ENST00000471181 RAB18Q9NP72 206 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 CLEC5AQ9NY25 188 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 DNMT3BQ9UBC3 853 aaKnown RBP6.45□□□□□ -1.38
BRCA1-210ENST00000471181 PGAP2Q9UHJ9 254 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 PRELID3BQ9Y3B1 194 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 POMT1Q9Y6A1 747 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 COL18A1P39060 1754 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 M0R3H8 397 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 TGOLN2O43493 480 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 SLC16A7O60669 478 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 ICMTO60725 284 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 SLC43A1O75387 559 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 PMP2P02689 132 aa6.45□□□□□ -1.38
BRCA1-210ENST00000471181 GYPBP06028 91 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms