RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 PTDSS2Q9BVG9 487 aa11.32□□□□□ -0.6
SND1-209ENST00000470723 FNDC11Q9BVV2 318 aa11.32□□□□□ -0.6
SND1-209ENST00000470723 CHID1Q9BWS9 393 aa11.32□□□□□ -0.6
SND1-209ENST00000470723 OR11A1Q9GZK7 315 aa11.32□□□□□ -0.6
SND1-209ENST00000470723 TMEM185BQ9H7F4 350 aa11.32□□□□□ -0.6
SND1-209ENST00000470723 ARMC1Q9NVT9 282 aa11.32□□□□□ -0.6
SND1-209ENST00000470723 CLCF1Q9UBD9 225 aa11.32□□□□□ -0.6
SND1-209ENST00000470723 SLC7A7Q9UM01 511 aa11.32□□□□□ -0.6
SND1-209ENST00000470723 MEMO1Q9Y316 297 aa11.32□□□□□ -0.6
SND1-209ENST00000470723 NAV2Q8IVL1 2488 aa11.32□□□□□ -0.6
SND1-209ENST00000470723 DIDO1Q9BTC0 2240 aaKnown RBP11.32□□□□□ -0.6
SND1-209ENST00000470723 DOCK7Q96N67 2140 aa11.32□□□□□ -0.6
SND1-209ENST00000470723 TRAV36DV7A0A075B6V5 113 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 A0A1W2PNR3 127 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 MBD3L4A6NDZ8 208 aaPredicted RBP11.31□□□□□ -0.6
SND1-209ENST00000470723 MBD3L3A6NE82 208 aaPredicted RBP11.31□□□□□ -0.6
SND1-209ENST00000470723 MBD3L5A6NJ08 208 aaPredicted RBP11.31□□□□□ -0.6
SND1-209ENST00000470723 CLCA1A8K7I4 914 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 H0Y3Z8 333 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 PYCARD-AS1I3L0S3 204 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 SULT2B1O00204 365 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 TNFSF11O14788 317 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 EIF1BO60739 113 aaKnown RBP11.31□□□□□ -0.6
SND1-209ENST00000470723 CIB2O75838 187 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 RCBTB2O95199 551 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 H1F0P07305 194 aaKnown RBP11.31□□□□□ -0.6
SND1-209ENST00000470723 GLI4P10075 376 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 CCNA2P20248 432 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 SLC7A1P30825 629 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 YAP1P46937 504 aaKnown RBP11.31□□□□□ -0.6
SND1-209ENST00000470723 LIMS1P48059 325 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 SLC35A1P78382 337 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 LTBQ06643 244 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 GK3PQ14409 553 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 MFSD13AQ14CX5 517 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 PDK3Q15120 406 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 C4orf17Q53FE4 359 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 TTC33Q6PID6 262 aaPredicted RBP11.31□□□□□ -0.6
SND1-209ENST00000470723 POMZP3Q6PJE2 187 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 CHMP1BQ7LBR1 199 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 SPATA24Q86W54 205 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 C10orf67Q8IYJ2 551 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 UBQLNLQ8IYU4 475 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 ATP6V1C2Q8NEY4 427 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 MBD3L2Q8NHZ7 208 aaPredicted RBP11.31□□□□□ -0.6
SND1-209ENST00000470723 SLC7A13Q8TCU3 470 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 TMEM239Q8WW34 195 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 CPNE4Q96A23 557 aaPredicted RBP11.31□□□□□ -0.6
SND1-209ENST00000470723 KTI12Q96EK9 354 aaPredicted RBP11.31□□□□□ -0.6
SND1-209ENST00000470723 ZNF845Q96IR2 970 aaPredicted RBP11.31□□□□□ -0.6
SND1-209ENST00000470723 OR5B2Q96R09 309 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 EPYCQ99645 322 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 GP6Q9HCN6 339 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 MEPEQ9NQ76 525 aaPredicted RBP11.31□□□□□ -0.6
SND1-209ENST00000470723 ALKBH4Q9NXW9 302 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 TINAGQ9UJW2 476 aa11.31□□□□□ -0.6
SND1-209ENST00000470723 ALPK2Q86TB3 2170 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 A0A087WUU8 490 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 TRGV8A0A0C4DH27 118 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 LOC102725191A0A1B0GVB3 256 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 CLEC18AA5D8T8 446 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 WIPF3A6NGB9 483 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 hCG_2039718K7EN88 272 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 SEC14L5O43304 696 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 CXCL13O43927 109 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 TOXO94900 526 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 TGM6O95932 706 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 BGLAPP02818 100 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 MT-ND1P03886 318 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 TFPIP10646 304 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 IDUAP35475 653 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 EIF1AXP47813 144 aaKnown RBP11.3□□□□□ -0.6
SND1-209ENST00000470723 UQCRFS1P47985 274 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 CTBP2P56545 445 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 PRKCDQ05655 676 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 SGCBQ16585 318 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 FAM69AQ5T7M9 428 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 GTF2IRD2BQ6EKJ0 949 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 CLEC18BQ6UXF7 455 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 B3GNT6Q6ZMB0 384 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 GTF2IRD2Q86UP8 949 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 SLC43A2Q8N370 569 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 MARVELD2Q8N4S9 558 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 CLEC18CQ8NCF0 446 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 PRR7Q8TB68 274 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 ACOT11Q8WXI4 607 aaPredicted RBP11.3□□□□□ -0.6
SND1-209ENST00000470723 SMPDL3BQ92485 455 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 TM9SF2Q99805 663 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 SRXN1Q9BYN0 137 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 DENND2DQ9H6A0 471 aaPredicted RBP11.3□□□□□ -0.6
SND1-209ENST00000470723 YY1AP1Q9H869 796 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 RNF122Q9H9V4 155 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 V9GYQ6 96 aa11.3□□□□□ -0.6
SND1-209ENST00000470723 NCOA6Q14686 2063 aaPredicted RBP11.29□□□□□ -0.6
SND1-209ENST00000470723 KIAA1549Q9HCM3 1950 aa11.29□□□□□ -0.6
SND1-209ENST00000470723 INTS1Q8N201 2190 aaKnown RBP11.29□□□□□ -0.6
SND1-209ENST00000470723 KDM4EB2RXH2 506 aaPredicted RBP11.29□□□□□ -0.6
SND1-209ENST00000470723 CCL21O00585 134 aa11.29□□□□□ -0.6
SND1-209ENST00000470723 LRRTM2O43300 516 aa11.29□□□□□ -0.6
SND1-209ENST00000470723 CYTIPO60759 359 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms