RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 CCT8L2Q96SF2 557 aa10.29□□□□□ -0.76
LSM2-209ENST00000470083 OR11A1Q9GZK7 315 aa10.29□□□□□ -0.76
LSM2-209ENST00000470083 CTPS2Q9NRF8 586 aa10.29□□□□□ -0.76
LSM2-209ENST00000470083 GRHL1Q9NZI5 618 aa10.29□□□□□ -0.76
LSM2-209ENST00000470083 TMEM181Q9P2C4 612 aa10.29□□□□□ -0.76
LSM2-209ENST00000470083 TIMM22Q9Y584 194 aa10.29□□□□□ -0.76
LSM2-209ENST00000470083 ZNF587BE7ETH6 402 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 NPIPB8E9PQR5 432 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 NR5A2O00482 541 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 CYP7B1O75881 506 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 KRT33AO76009 404 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 URI1O94763 535 aaPredicted RBP10.28□□□□□ -0.76
LSM2-209ENST00000470083 SBK3P0C264 359 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 TCN1P20061 433 aaPredicted RBP10.28□□□□□ -0.76
LSM2-209ENST00000470083 MAGEA12P43365 314 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 SLC35A1P78382 337 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 SRSF4Q08170 494 aaKnown RBP10.28□□□□□ -0.76
LSM2-209ENST00000470083 BAMBIQ13145 260 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 DAG1Q14118 895 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 UNC50Q53HI1 259 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 ZNF385BQ569K4 471 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 PDZK1Q5T2W1 519 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 SAXO2Q658L1 398 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 NOXRED1Q6NXP6 359 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 AAED1Q7RTV5 226 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 ADGRG3Q86Y34 549 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 C1QL4Q86Z23 238 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 SLC35F6Q8N357 371 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 ZIC4Q8N9L1 334 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 TAF15Q92804 592 aaKnown RBP eCLIP10.28□□□□□ -0.76
LSM2-209ENST00000470083 MRRFQ96E11 262 aaKnown RBP10.28□□□□□ -0.76
LSM2-209ENST00000470083 AURKBQ96GD4 344 aaPredicted RBP10.28□□□□□ -0.76
LSM2-209ENST00000470083 GPA33Q99795 319 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 NAA11Q9BSU3 229 aaPredicted RBP10.28□□□□□ -0.76
LSM2-209ENST00000470083 MRPL37Q9BZE1 423 aaKnown RBP10.28□□□□□ -0.76
LSM2-209ENST00000470083 NOX3Q9HBY0 568 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 ZCCHC3Q9NUD5 404 aaKnown RBP10.28□□□□□ -0.76
LSM2-209ENST00000470083 STK38LQ9Y2H1 464 aa10.28□□□□□ -0.76
LSM2-209ENST00000470083 A0A096LPE4 126 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 A0A1W2PPZ6 126 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 TBX19O60806 448 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 NCR1O76036 304 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 KNG1P01042 644 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 CBR1P16152 277 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 PKNOX1P55347 436 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 UAP1Q16222 522 aaPredicted RBP10.27□□□□□ -0.77
LSM2-209ENST00000470083 IMPG1Q17R60 797 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 MSMPQ1L6U9 139 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 ZNF678Q5SXM1 525 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 KRT80Q6KB66 452 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 PAQR6Q6TCH4 344 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 C17orf107Q6ZR85 190 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 GRINAQ7Z429 371 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 GAS2L3Q86XJ1 694 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 TMEM151AQ8N4L1 468 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 IL17RDQ8NFM7 739 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 OR9K2Q8NGE7 335 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 TMIGD2Q96BF3 282 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 PPCDCQ96CD2 204 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 ZNF385AQ96PM9 386 aaKnown RBP10.27□□□□□ -0.77
LSM2-209ENST00000470083 ALKBH3Q96Q83 286 aaPredicted RBP10.27□□□□□ -0.77
LSM2-209ENST00000470083 KCNA7Q96RP8 456 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 CITED1Q99966 193 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 ACTRT3Q9BYD9 372 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 NMUR2Q9GZQ4 415 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 NELFAQ9H3P2 528 aa10.27□□□□□ -0.77
LSM2-209ENST00000470083 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.27□□□□□ -0.77
LSM2-209ENST00000470083 SIRT3Q9NTG7 399 aaPredicted RBP10.27□□□□□ -0.77
LSM2-209ENST00000470083 A0A1B0GUS0 222 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 TIMM23O14925 209 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 SKAP2O75563 359 aaPredicted RBP10.26□□□□□ -0.77
LSM2-209ENST00000470083 RSL1D1O76021 490 aaKnown RBP10.26□□□□□ -0.77
LSM2-209ENST00000470083 CSTAP01040 98 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 IGHV2-5P01817 119 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 UBTFL6P0CB48 400 aaPredicted RBP10.26□□□□□ -0.77
LSM2-209ENST00000470083 TCP1P17987 556 aaKnown RBP10.26□□□□□ -0.77
LSM2-209ENST00000470083 NR4A1P22736 598 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 ALDH3B1P43353 468 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 MAGEA4P43358 317 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 SH3BGRP55822 239 aaPredicted RBP10.26□□□□□ -0.77
LSM2-209ENST00000470083 LCP2Q13094 533 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 SLC9A3R2Q15599 337 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 OTUD3Q5T2D3 398 aaPredicted RBP10.26□□□□□ -0.77
LSM2-209ENST00000470083 RHOUQ7L0Q8 258 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 TRIM46Q7Z4K8 759 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 TREML1Q86YW5 311 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 ADAMTS15Q8TE58 950 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 UBE2FQ969M7 185 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 TMEM237Q96Q45 408 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 SF3B5Q9BWJ5 86 aaKnown RBP10.26□□□□□ -0.77
LSM2-209ENST00000470083 DPH5Q9H2P9 285 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 PIF1Q9H611 641 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 ZNF385DQ9H6B1 395 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 REEP4Q9H6H4 257 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 PLEK2Q9NYT0 353 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 SH3BP4Q9P0V3 963 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 ZNF69Q9UC07 566 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 NUP50Q9UKX7 468 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 KCNE3Q9Y6H6 103 aa10.26□□□□□ -0.77
LSM2-209ENST00000470083 CCDC188H7C350 402 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms