RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 RHNO1Q9BSD3 238 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 INPP5KQ9BT40 448 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 PARD6BQ9BYG5 372 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 AMBRA1Q9C0C7 1298 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 CBLN4Q9NTU7 201 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 UPB1Q9UBR1 384 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 DCTN4Q9UJW0 460 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 FLVCR1Q9Y5Y0 555 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 GPR45Q9Y5Y3 372 aa15.37■□□□□ 0.05
COL7A1-208ENST00000470076 CD5LO43866 347 aa15.36■□□□□ 0.05
COL7A1-208ENST00000470076 SSX4O60224 188 aa15.36■□□□□ 0.05
COL7A1-208ENST00000470076 KRT75O95678 551 aa15.36■□□□□ 0.05
COL7A1-208ENST00000470076 PTNP21246 168 aa15.36■□□□□ 0.05
COL7A1-208ENST00000470076 IL12AP29459 219 aa15.36■□□□□ 0.05
COL7A1-208ENST00000470076 FOXG1P55316 489 aaPredicted RBP15.36■□□□□ 0.05
COL7A1-208ENST00000470076 TGFBR3Q03167 851 aa15.36■□□□□ 0.05
COL7A1-208ENST00000470076 EPS8Q12929 822 aa15.36■□□□□ 0.05
COL7A1-208ENST00000470076 SLC17A1Q14916 467 aa15.36■□□□□ 0.05
COL7A1-208ENST00000470076 GSTA3Q16772 222 aa15.36■□□□□ 0.05
COL7A1-208ENST00000470076 HHATQ5VTY9 493 aa15.36■□□□□ 0.05
COL7A1-208ENST00000470076 C11orf71Q6IPW1 123 aa15.36■□□□□ 0.05
COL7A1-208ENST00000470076 PEX5LQ8IYB4 626 aa15.36■□□□□ 0.05
COL7A1-208ENST00000470076 FBXL14Q8N1E6 418 aa15.36■□□□□ 0.05
COL7A1-208ENST00000470076 MUC15Q8N387 334 aa15.36■□□□□ 0.05
COL7A1-208ENST00000470076 OR52E4Q8NGH9 312 aa15.36■□□□□ 0.05
COL7A1-208ENST00000470076 CACNG6Q9BXT2 260 aa15.36■□□□□ 0.05
COL7A1-208ENST00000470076 ADAM19Q9H013 955 aa15.36■□□□□ 0.05
COL7A1-208ENST00000470076 AMDHD2Q9Y303 409 aa15.36■□□□□ 0.05
COL7A1-208ENST00000470076 A0A1W2PR80 420 aa15.35■□□□□ 0.05
COL7A1-208ENST00000470076 TRPC5OSA6NMA1 111 aa15.35■□□□□ 0.05
COL7A1-208ENST00000470076 M0R1B8 84 aa15.35■□□□□ 0.05
COL7A1-208ENST00000470076 HDAC3O15379 428 aa15.35■□□□□ 0.05
COL7A1-208ENST00000470076 GSNP06396 782 aa15.35■□□□□ 0.05
COL7A1-208ENST00000470076 EPHA3P29320 983 aa15.35■□□□□ 0.05
COL7A1-208ENST00000470076 NUDT6P53370 316 aa15.35■□□□□ 0.05
COL7A1-208ENST00000470076 DSCR9P59020 149 aa15.35■□□□□ 0.05
COL7A1-208ENST00000470076 IRX1P78414 480 aaPredicted RBP15.35■□□□□ 0.05
COL7A1-208ENST00000470076 SPOCK1Q08629 439 aa15.35■□□□□ 0.05
COL7A1-208ENST00000470076 COX20Q5RI15 118 aa15.35■□□□□ 0.05
COL7A1-208ENST00000470076 ZNF544Q6NX49 715 aa15.35■□□□□ 0.05
COL7A1-208ENST00000470076 PNPT1Q8TCS8 783 aaKnown RBP15.35■□□□□ 0.05
COL7A1-208ENST00000470076 TMEM45BQ96B21 275 aa15.35■□□□□ 0.05
COL7A1-208ENST00000470076 SLC7A10Q9NS82 523 aa15.35■□□□□ 0.05
COL7A1-208ENST00000470076 THAP1Q9NVV9 213 aa15.35■□□□□ 0.05
COL7A1-208ENST00000470076 FBN3Q75N90 2809 aa15.35■□□□□ 0.05
COL7A1-208ENST00000470076 STAB1Q9NY15 2570 aa15.35■□□□□ 0.05
COL7A1-208ENST00000470076 ZC3H12DA2A288 527 aaKnown RBP15.34■□□□□ 0.05
COL7A1-208ENST00000470076 CDHR4A6H8M9 788 aa15.34■□□□□ 0.05
COL7A1-208ENST00000470076 RFXANKO14593 260 aa15.34■□□□□ 0.05
COL7A1-208ENST00000470076 IL6P05231 212 aa15.34■□□□□ 0.05
COL7A1-208ENST00000470076 GPIP06744 558 aa15.34■□□□□ 0.05
COL7A1-208ENST00000470076 IDO1P14902 403 aa15.34■□□□□ 0.05
COL7A1-208ENST00000470076 CXCR1P25024 350 aa15.34■□□□□ 0.05
COL7A1-208ENST00000470076 FABP6P51161 128 aa15.34■□□□□ 0.05
COL7A1-208ENST00000470076 OTUD3Q5T2D3 398 aaPredicted RBP15.34■□□□□ 0.05
COL7A1-208ENST00000470076 TSPO2Q5TGU0 170 aa15.34■□□□□ 0.05
COL7A1-208ENST00000470076 CLEC2AQ6UVW9 174 aa15.34■□□□□ 0.05
COL7A1-208ENST00000470076 CXXC5Q7LFL8 322 aaKnown RBP15.34■□□□□ 0.05
COL7A1-208ENST00000470076 WDR31Q8NA23 367 aa15.34■□□□□ 0.05
COL7A1-208ENST00000470076 SF3B5Q9BWJ5 86 aaKnown RBP15.34■□□□□ 0.05
COL7A1-208ENST00000470076 C1QTNF6Q9BXI9 259 aa15.34■□□□□ 0.05
COL7A1-208ENST00000470076 PIF1Q9H611 641 aa15.34■□□□□ 0.05
COL7A1-208ENST00000470076 WDR55Q9H6Y2 383 aaPredicted RBP15.34■□□□□ 0.05
COL7A1-208ENST00000470076 FKRPQ9H9S5 495 aa15.34■□□□□ 0.05
COL7A1-208ENST00000470076 SLC17A5Q9NRA2 495 aa15.34■□□□□ 0.05
COL7A1-208ENST00000470076 YAE1D1Q9NRH1 226 aa15.34■□□□□ 0.05
COL7A1-208ENST00000470076 CALML5Q9NZT1 146 aa15.34■□□□□ 0.05
COL7A1-208ENST00000470076 P2RX2Q9UBL9 471 aa15.34■□□□□ 0.05
COL7A1-208ENST00000470076 IGHV4-30-2A0A087WSY4 118 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 LIPT2A6NK58 231 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 SLCO1B7G3V0H7 640 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 H7C417 338 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 SNNO75324 88 aaPredicted RBP15.33■□□□□ 0.04
COL7A1-208ENST00000470076 BMP4P12644 408 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 MPGP29372 298 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 COPZ1P61923 177 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 CEACAM7Q14002 265 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 RAB35Q15286 201 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 MAPK11Q15759 364 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 ZSWIM7Q19AV6 140 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 LIN52Q52LA3 116 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 C9orf135Q5VTT2 229 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 B3GLCTQ6Y288 498 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 HIPK1Q86Z02 1210 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 ANKRD42Q8N9B4 389 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 POMGNT2Q8NAT1 580 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 OR10H5Q8NGA6 315 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 OR52P1PQ8NH57 321 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 SPATA3Q8NHX4 192 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 RLIMQ9NVW2 624 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 RAB21Q9UL25 225 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 DSPPQ9NZW4 1301 aa15.33■□□□□ 0.04
COL7A1-208ENST00000470076 FAM234BA2RU67 622 aa15.32■□□□□ 0.04
COL7A1-208ENST00000470076 AQP7P3A6NL99 342 aa15.32■□□□□ 0.04
COL7A1-208ENST00000470076 SLC22A3O75751 556 aa15.32■□□□□ 0.04
COL7A1-208ENST00000470076 WNT11O96014 354 aa15.32■□□□□ 0.04
COL7A1-208ENST00000470076 ZCCHC18P0CG32 403 aa15.32■□□□□ 0.04
COL7A1-208ENST00000470076 ACAA2P42765 397 aaKnown RBP15.32■□□□□ 0.04
COL7A1-208ENST00000470076 MVDP53602 400 aa15.32■□□□□ 0.04
COL7A1-208ENST00000470076 CRISP3P54108 245 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms