RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 TMEM218A2RU14 115 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 KDM4EB2RXH2 506 aaPredicted RBP9.22□□□□□ -0.93
NUP50-214ENST00000469163 LRRTM2O43300 516 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 PNPP00491 289 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 HPP00738 406 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 FAM157BP0CG42 384 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 PTNP21246 168 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 ARL4DP49703 201 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 CAV3P56539 151 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 UNC50Q53HI1 259 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 RNASE12Q5GAN4 147 aaKnown RBP9.22□□□□□ -0.93
NUP50-214ENST00000469163 ADAM5Q6NVV9 412 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 GOLGA7Q7Z5G4 137 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 CAMKMTQ7Z624 323 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 PTRH1Q86Y79 214 aaKnown RBP9.22□□□□□ -0.93
NUP50-214ENST00000469163 THNSL2Q86YJ6 484 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 GPR150Q8NGU9 434 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 ZNF385AQ96PM9 386 aaKnown RBP9.22□□□□□ -0.93
NUP50-214ENST00000469163 UBFD1O14562 309 aaKnown RBP9.22□□□□□ -0.93
NUP50-214ENST00000469163 PHOX2AO14813 284 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 EFEMP2O95967 443 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 IFNGP01579 166 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 THBS1P07996 1170 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 AKR1C3P42330 323 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 HTR4Q13639 388 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 PDZD11Q5EBL8 140 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 AGTRAPQ6RW13 159 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 ETFBKMTQ8IXQ9 262 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 MAML2Q8IZL2 1156 aaPredicted RBP9.22□□□□□ -0.93
NUP50-214ENST00000469163 GPR137CQ8N3F9 429 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 OR5M9Q8NGP3 310 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 GGHQ92820 318 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 L3HYPDHQ96EM0 354 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 NAA11Q9BSU3 229 aaPredicted RBP9.22□□□□□ -0.93
NUP50-214ENST00000469163 RNF32Q9H0A6 362 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 FGF22Q9HCT0 170 aa9.22□□□□□ -0.93
NUP50-214ENST00000469163 GAR1Q9NY12 217 aaKnown RBP9.22□□□□□ -0.93
NUP50-214ENST00000469163 ALPK2Q86TB3 2170 aa9.21□□□□□ -0.93
NUP50-214ENST00000469163 SLC35F4A4IF30 521 aa9.21□□□□□ -0.93
NUP50-214ENST00000469163 ERCC1P07992 297 aaPredicted RBP9.21□□□□□ -0.93
NUP50-214ENST00000469163 GSTP1P09211 210 aaKnown RBP9.21□□□□□ -0.93
NUP50-214ENST00000469163 GPX3P22352 226 aa9.21□□□□□ -0.93
NUP50-214ENST00000469163 FDXRP22570 491 aa9.21□□□□□ -0.93
NUP50-214ENST00000469163 CTBP2P56545 445 aa9.21□□□□□ -0.93
NUP50-214ENST00000469163 RBBP4Q09028 425 aa9.21□□□□□ -0.93
NUP50-214ENST00000469163 KEAP1Q14145 624 aa9.21□□□□□ -0.93
NUP50-214ENST00000469163 ABRAXAS2Q15018 415 aa9.21□□□□□ -0.93
NUP50-214ENST00000469163 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.21□□□□□ -0.93
NUP50-214ENST00000469163 ZNF678Q5SXM1 525 aa9.21□□□□□ -0.93
NUP50-214ENST00000469163 ZNF385CQ66K41 422 aaPredicted RBP9.21□□□□□ -0.93
NUP50-214ENST00000469163 CAPN13Q6MZZ7 669 aaPredicted RBP9.21□□□□□ -0.93
NUP50-214ENST00000469163 Q6ZPB1 254 aaPredicted RBP9.21□□□□□ -0.93
NUP50-214ENST00000469163 FAM83HQ6ZRV2 1179 aaPredicted RBP9.21□□□□□ -0.93
NUP50-214ENST00000469163 ZNF621Q6ZSS3 439 aa9.21□□□□□ -0.93
NUP50-214ENST00000469163 ZNF605Q86T29 641 aa9.21□□□□□ -0.93
NUP50-214ENST00000469163 RANBP3LQ86VV4 465 aaPredicted RBP9.21□□□□□ -0.93
NUP50-214ENST00000469163 DNAAF1Q8NEP3 725 aa9.21□□□□□ -0.93
NUP50-214ENST00000469163 ZNF514Q96K75 400 aaPredicted RBP9.21□□□□□ -0.93
NUP50-214ENST00000469163 MYOZ1Q9NP98 299 aaPredicted RBP9.21□□□□□ -0.93
NUP50-214ENST00000469163 THAP10Q9P2Z0 257 aaPredicted RBP9.21□□□□□ -0.93
NUP50-214ENST00000469163 PPIL1Q9Y3C6 166 aa9.21□□□□□ -0.93
NUP50-214ENST00000469163 MIA3Q5JRA6 1907 aa9.21□□□□□ -0.93
NUP50-214ENST00000469163 SDK2Q58EX2 2172 aa9.21□□□□□ -0.93
NUP50-214ENST00000469163 IQCMA0A1B0GVH7 501 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 FAM86C2PA6NEL3 165 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 MGAT4DA6NG13 374 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 CLCA1A8K7I4 914 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 E7EQ34 232 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 SEC14L5O43304 696 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 IGF2P01344 180 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 CELA2BP08218 269 aaPredicted RBP9.21□□□□□ -0.94
NUP50-214ENST00000469163 C8orf89P0DMQ9 161 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 ITGB7P26010 798 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 HTR1EP28566 365 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 PRKXP51817 358 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 EEFSECP57772 596 aaKnown RBP9.21□□□□□ -0.94
NUP50-214ENST00000469163 CDK3Q00526 305 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 NFKB2Q00653 900 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 ACSM2AQ08AH3 577 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 DYRK1AQ13627 763 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 ACSM2BQ68CK6 577 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 TMEM108Q6UXF1 575 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 PDZD3Q86UT5 571 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 SLC35F3Q8IY50 421 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 KRTCAP2Q8N6L1 136 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 FBLIM1Q8WUP2 373 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 DTD2Q96FN9 168 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 DUSP15Q9H1R2 295 aaPredicted RBP9.21□□□□□ -0.94
NUP50-214ENST00000469163 DPAGT1Q9H3H5 408 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 PCDHB1Q9Y5F3 818 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 DNAJC15Q9Y5T4 150 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 C5orf58C9J3I9 102 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 RNF13O43567 381 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 NSA2O95478 260 aaKnown RBP9.21□□□□□ -0.94
NUP50-214ENST00000469163 DRD5P21918 477 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 IDSP22304 550 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 PCGF2P35227 344 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 DRD3P35462 400 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 AVPR1BP47901 424 aa9.21□□□□□ -0.94
NUP50-214ENST00000469163 RPS14P62263 151 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms