RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 RYKP34925 604 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 RBM34P42696 430 aaKnown RBP3.16□□□□□ -1.9
TRIM59-202ENST00000468542 MAGEA2P43356 314 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 UQCRFS1P47985 274 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 IDH2P48735 452 aaKnown RBP3.16□□□□□ -1.9
TRIM59-202ENST00000468542 ST13P50502 369 aaKnown RBP3.16□□□□□ -1.9
TRIM59-202ENST00000468542 CCR4P51679 360 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 AGFG1P52594 562 aaKnown RBP3.16□□□□□ -1.9
TRIM59-202ENST00000468542 SLC16A1P53985 500 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 CLDN15P56746 228 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 RGS8P57771 180 aaPredicted RBP3.16□□□□□ -1.9
TRIM59-202ENST00000468542 NCALDP61601 193 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 CSNK2A1P68400 391 aaPredicted RBP3.16□□□□□ -1.9
TRIM59-202ENST00000468542 H3F3AP84243 136 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 HSF1Q00613 529 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 SF3A3Q12874 501 aaKnown RBP eCLIP3.16□□□□□ -1.9
TRIM59-202ENST00000468542 TRAP1Q12931 704 aaKnown RBP3.16□□□□□ -1.9
TRIM59-202ENST00000468542 MRPL49Q13405 166 aaKnown RBP3.16□□□□□ -1.9
TRIM59-202ENST00000468542 CEACAM7Q14002 265 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 DGCR6Q14129 220 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 TRIM25Q14258 630 aaKnown RBP3.16□□□□□ -1.9
TRIM59-202ENST00000468542 RNPS1Q15287 305 aaKnown RBP3.16□□□□□ -1.9
TRIM59-202ENST00000468542 TOMM20Q15388 145 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 GUSBP1Q15486 140 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 TOMM34Q15785 309 aaPredicted RBP3.16□□□□□ -1.9
TRIM59-202ENST00000468542 IGFBP7Q16270 282 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 C3AR1Q16581 482 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 ZNF239Q16600 458 aaKnown RBP3.16□□□□□ -1.9
TRIM59-202ENST00000468542 SWI5Q1ZZU3 235 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 SLC25A35Q3KQZ1 300 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 FBXL19-AS1Q494R0 122 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 ANKDD1AQ495B1 522 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 IFI44LQ53G44 452 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 CYBRD1Q53TN4 286 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 ALG10BQ5I7T1 473 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 COLEC12Q5KU26 742 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 DCST1Q5T197 706 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 FAM69AQ5T7M9 428 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 C1orf185Q5T7R7 199 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 LCE4AQ5TA78 99 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 RTL6Q6ICC9 239 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 LCN8Q6JVE9 175 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 PGM2L1Q6PCE3 622 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 TMPPEQ6ZT21 453 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 SEM1Q6ZVN7 128 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 CBLL1Q75N03 491 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 CHMP1BQ7LBR1 199 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 SSX8Q7RTT4 187 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 YRDCQ86U90 279 aaKnown RBP3.16□□□□□ -1.9
TRIM59-202ENST00000468542 VRK2Q86Y07 508 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 ADGRG3Q86Y34 549 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 DEFB107AQ8IZN7 70 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 LILRA2Q8N149 483 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 CLIP4Q8N3C7 705 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 TMCO5AQ8N6Q1 288 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 GATSQ8NAP1 163 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 ACBD4Q8NC06 268 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 FAM156AQ8NDB6 213 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 ADPRHL1Q8NDY3 354 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 GPR32P1Q8NGA4 272 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 OR6T1Q8NGN1 323 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 OR10D3Q8NH80 312 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 OR2V1Q8NHB1 315 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 MFSD8Q8NHS3 518 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 ZNF563Q8TA94 476 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 SLC26A7Q8TE54 656 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 ADAMTS16Q8TE57 1224 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 RNF128Q8TEB7 428 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 SSC4DQ8WTU2 575 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 ASB5Q8WWX0 329 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 LIPHQ8WWY8 451 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 SLC38A4Q969I6 547 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 C3orf49Q96BT1 292 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 SLC7A6OSQ96CW6 309 aaPredicted RBP3.16□□□□□ -1.9
TRIM59-202ENST00000468542 DDIT4LQ96D03 193 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 ZHX1-C8orf76Q96EF9 292 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 SLC47A1Q96FL8 570 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 SLC41A3Q96GZ6 507 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 SH3YL1Q96HL8 342 aaPredicted RBP3.16□□□□□ -1.9
TRIM59-202ENST00000468542 GMPPAQ96IJ6 420 aaPredicted RBP3.16□□□□□ -1.9
TRIM59-202ENST00000468542 PRRC1Q96M27 445 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 HS6ST2Q96MM7 605 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 CDRT15Q96T59 188 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 EPYCQ99645 322 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 BTBD10Q9BSF8 475 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 TMEM43Q9BTV4 400 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 SF3B5Q9BWJ5 86 aaKnown RBP3.16□□□□□ -1.9
TRIM59-202ENST00000468542 SFXN3Q9BWM7 321 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 RSPO3Q9BXY4 272 aaPredicted RBP3.16□□□□□ -1.9
TRIM59-202ENST00000468542 TRIM8Q9BZR9 551 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 TRIM15Q9C019 465 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 LRMDAQ9H2I8 198 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 PIGMQ9H3S5 423 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 COQ10BQ9H8M1 238 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 BCO1Q9HAY6 547 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 TMEM27Q9HBJ8 222 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 FANCFQ9NPI8 374 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 PNPLA3Q9NST1 481 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 COQ3Q9NZJ6 369 aa3.16□□□□□ -1.9
TRIM59-202ENST00000468542 ADA2Q9NZK5 511 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms