RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 PRDM7Q9NQW5 492 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 PLEK2Q9NYT0 353 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 NUFIP1Q9UHK0 495 aaKnown RBP12.75□□□□□ -0.37
BRAT1-203ENST00000467558 SNX11Q9Y5W9 270 aa12.75□□□□□ -0.37
BRAT1-203ENST00000467558 TRAV18A0A075B6X5 111 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 DCDC2BA2VCK2 349 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 KRBA1A5PL33 1030 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 SNAPC5O75971 98 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 GABARAPO95166 117 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 FBXO45P0C2W1 286 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 POU3F4P49335 361 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 CADM4Q8NFZ8 388 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 ADAMTS14Q8WXS8 1223 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 FAM210AQ96ND0 272 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 CCNL2Q96S94 520 aaPredicted RBP12.74□□□□□ -0.37
BRAT1-203ENST00000467558 CTRCQ99895 268 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 GABARAPL3Q9BY60 117 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 TP63Q9H3D4 680 aaPredicted RBP12.74□□□□□ -0.37
BRAT1-203ENST00000467558 NUP214P35658 2090 aaPredicted RBP12.74□□□□□ -0.37
BRAT1-203ENST00000467558 KANTRA0A1W2PQU2 76 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 METTL15A6NJ78 407 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 A8MVM7 634 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 GABRPO00591 440 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 TBX19O60806 448 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 KCNK2O95069 426 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 POU3F2P20265 443 aaPredicted RBP12.74□□□□□ -0.37
BRAT1-203ENST00000467558 PRSS3P35030 304 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 GFERP55789 205 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 UBE2NP61088 152 aaKnown RBP12.74□□□□□ -0.37
BRAT1-203ENST00000467558 EEF1A1P68104 462 aaKnown RBP12.74□□□□□ -0.37
BRAT1-203ENST00000467558 ARG2P78540 354 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 MLC1Q15049 377 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 CHRFAM7AQ494W8 412 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 SPIN3Q5JUX0 258 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 CASTOR1Q8WTX7 329 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 NMNAT3Q96T66 252 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 LRRC61Q9BV99 259 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 V9GY05 133 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 F5H5K5 113 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 L7N2F9 121 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 LYRM1O43325 122 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 RAD1O60671 282 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 LCATP04180 440 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 ANXA3P12429 323 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 TNFSF8P32971 234 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 FXYD6P3P58550 94 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 PRAMEF20Q5VT98 475 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 PIAS4Q8N2W9 510 aaPredicted RBP12.74□□□□□ -0.37
BRAT1-203ENST00000467558 LINC01555Q8NAE3 123 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 SGCDQ92629 289 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 OR5M11Q96RB7 305 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 LMF1Q96S06 567 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 MBOAT4Q96T53 435 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 CHRDQ9H2X0 955 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 ZNF701Q9NV72 531 aaPredicted RBP12.74□□□□□ -0.37
BRAT1-203ENST00000467558 WNT16Q9UBV4 365 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 RASD1Q9Y272 281 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 KDM4EB2RXH2 506 aaPredicted RBP12.74□□□□□ -0.37
BRAT1-203ENST00000467558 IDSB3KWA1 339 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 SMIM18P0DKX4 95 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 NME1P15531 152 aaKnown RBP12.74□□□□□ -0.37
BRAT1-203ENST00000467558 LCN1P31025 176 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 EIF1P41567 113 aaKnown RBP12.74□□□□□ -0.37
BRAT1-203ENST00000467558 CDNFQ49AH0 187 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 TMEM205Q6UW68 189 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 ADGRF3Q8IZF5 1079 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 FAM26EQ8N5C1 309 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 OR1J4Q8NGS1 313 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 STT3BQ8TCJ2 826 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 NANOS1Q8WY41 292 aaKnown RBP12.74□□□□□ -0.37
BRAT1-203ENST00000467558 FAM71F1Q96KD3 344 aaPredicted RBP12.74□□□□□ -0.37
BRAT1-203ENST00000467558 CHST8Q9H2A9 424 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 ELOVL3Q9HB03 270 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 FAIMQ9NVQ4 179 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 TAS2R16Q9NYV7 291 aa12.74□□□□□ -0.37
BRAT1-203ENST00000467558 TRPM6Q9BX84 2022 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 TMEM269A0A1B0GVZ9 245 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 OR2AT4A6NND4 320 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 SOCS6O14544 535 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 CTDSP2O14595 271 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 COL9A1P20849 921 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 MSX1P28360 303 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 HNRNPFP52597 415 aaKnown RBP12.73□□□□□ -0.37
BRAT1-203ENST00000467558 FAM219BQ5XKK7 198 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 OR7E24Q6IFN5 339 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 EIF5AL1Q6IS14 154 aaKnown RBP12.73□□□□□ -0.37
BRAT1-203ENST00000467558 OR5T2Q8NGG2 359 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 SLC2A12Q8TD20 617 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 GIMAP5Q96F15 307 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 SLC6A13Q9NSD5 602 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 PLCXD1Q9NUJ7 323 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 ZNF281Q9Y2X9 895 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 C13orf42A0A1B0GVH6 325 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 A6NL46 340 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 TEX46H3BTG2 121 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 H3BUI4 141 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 NARSO43776 548 aaKnown RBP12.73□□□□□ -0.37
BRAT1-203ENST00000467558 PLATP00750 562 aa12.73□□□□□ -0.37
BRAT1-203ENST00000467558 SIRPAP78324 504 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms