RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 RETREG3Q86VR2 466 aa8.75□□□□□ -1.01
HDAC3-203ENST00000467533 NOA1Q8NC60 698 aaKnown RBP8.75□□□□□ -1.01
HDAC3-203ENST00000467533 ZFP28Q8NHY6 868 aa8.75□□□□□ -1.01
HDAC3-203ENST00000467533 ZNF483Q8TF39 744 aaPredicted RBP8.75□□□□□ -1.01
HDAC3-203ENST00000467533 TMEM234Q8WY98 164 aa8.75□□□□□ -1.01
HDAC3-203ENST00000467533 TMEM45BQ96B21 275 aa8.75□□□□□ -1.01
HDAC3-203ENST00000467533 C16orf58Q96GQ5 468 aa8.75□□□□□ -1.01
HDAC3-203ENST00000467533 THUMPD3Q9BV44 507 aaKnown RBP8.75□□□□□ -1.01
HDAC3-203ENST00000467533 RSPO3Q9BXY4 272 aaPredicted RBP8.75□□□□□ -1.01
HDAC3-203ENST00000467533 TRIM31Q9BZY9 425 aa8.75□□□□□ -1.01
HDAC3-203ENST00000467533 MS4A7Q9GZW8 240 aaPredicted RBP8.75□□□□□ -1.01
HDAC3-203ENST00000467533 HOXD1Q9GZZ0 328 aa8.75□□□□□ -1.01
HDAC3-203ENST00000467533 IQCGQ9H095 443 aaKnown RBP8.75□□□□□ -1.01
HDAC3-203ENST00000467533 CRLF2Q9HC73 371 aa8.75□□□□□ -1.01
HDAC3-203ENST00000467533 TAS2R7Q9NYW3 318 aa8.75□□□□□ -1.01
HDAC3-203ENST00000467533 CHRNA9Q9UGM1 479 aa8.75□□□□□ -1.01
HDAC3-203ENST00000467533 TMCO1Q9UM00 188 aa8.75□□□□□ -1.01
HDAC3-203ENST00000467533 HDGFL3Q9Y3E1 203 aa8.75□□□□□ -1.01
HDAC3-203ENST00000467533 DTNAQ9Y4J8 743 aa8.75□□□□□ -1.01
HDAC3-203ENST00000467533 A0A1W2PPW3 197 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 CLPSL1A2RUU4 121 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 FAM181BA6NEQ2 426 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 ULK1O75385 1050 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 SEC14L2O76054 403 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 SEC31AO94979 1220 aaKnown RBP8.74□□□□□ -1.01
HDAC3-203ENST00000467533 NGFP01138 241 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 NAT2P11245 290 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 MTNR1AP48039 350 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 ATP12AP54707 1039 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 KRTAP10-3P60369 221 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 HLXQ14774 488 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-203ENST00000467533 SLC17A1Q14916 467 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 MSMPQ1L6U9 139 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 KLF17Q5JT82 389 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-203ENST00000467533 SPDYAQ5MJ70 313 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 ZCCHC12Q6PEW1 402 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 FAM169BQ8N8A8 192 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 BCL2L2Q92843 193 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-203ENST00000467533 ZNF317Q96PQ6 595 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-203ENST00000467533 GAL3ST1Q99999 423 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 NAA11Q9BSU3 229 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-203ENST00000467533 OR11A1Q9GZK7 315 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 KCNF1Q9H3M0 494 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 ZNF385DQ9H6B1 395 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 CTPS2Q9NRF8 586 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 ACER3Q9NUN7 267 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 ZNF225Q9UK10 706 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 NOX1Q9Y5S8 564 aa8.74□□□□□ -1.01
HDAC3-203ENST00000467533 ARHGAP32A7KAX9 2087 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 CLDN25C9JDP6 229 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 CCDC188H7C350 402 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 CBR1P16152 277 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 SELEP16581 610 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 CCNA2P20248 432 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 MAGEB1P43366 347 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 LOXL3P58215 753 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 SLC35A1P78382 337 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 LASP1Q14847 261 aaKnown RBP8.73□□□□□ -1.01
HDAC3-203ENST00000467533 RASA2Q15283 850 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 C2orf68Q2NKX9 166 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 ALKBH6Q3KRA9 238 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 GLIPR1L2Q4G1C9 344 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 DCST2Q5T1A1 773 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 KPRPQ5T749 579 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-203ENST00000467533 MROH9Q5TGP6 573 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 ANKRD26P1Q6NSI1 321 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 GLB1L3Q8NCI6 653 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-203ENST00000467533 DEFB108BQ8NET1 73 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 ZNF563Q8TA94 476 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 METTL6Q8TCB7 284 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 MAGEE2Q8TD90 523 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-203ENST00000467533 ST7LQ8TDW4 575 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 CIDECQ96AQ7 238 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-203ENST00000467533 GPR78Q96P69 363 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 ZNF385AQ96PM9 386 aaKnown RBP8.73□□□□□ -1.01
HDAC3-203ENST00000467533 MRI1Q9BV20 369 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 VPS11Q9H270 941 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 NELFAQ9H3P2 528 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 TCF7L1Q9HCS4 588 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 DUSP22Q9NRW4 184 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 TNFRSF19Q9NS68 423 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 TMEM181Q9P2C4 612 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 MYEF2Q9P2K5 600 aaKnown RBP8.73□□□□□ -1.01
HDAC3-203ENST00000467533 ZNF346Q9UL40 294 aaKnown RBP8.73□□□□□ -1.01
HDAC3-203ENST00000467533 FZR1Q9UM11 496 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 WIPI2Q9Y4P8 454 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 POLR3HQ9Y535 204 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-203ENST00000467533 AUP1Q9Y679 476 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 TENM3Q9P273 2699 aa8.73□□□□□ -1.01
HDAC3-203ENST00000467533 MDFIC2A0A1B0GVS7 189 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 ISPDA4D126 451 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 ANKRD28O15084 1053 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 HOXA3O43365 443 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-203ENST00000467533 EIF1BO60739 113 aaKnown RBP8.72□□□□□ -1.01
HDAC3-203ENST00000467533 RBP1P09455 135 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 UBTFL6P0CB48 400 aaPredicted RBP8.72□□□□□ -1.01
HDAC3-203ENST00000467533 BCKDHAP12694 445 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 NR4A1P22736 598 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 ARR3P36575 388 aa8.72□□□□□ -1.01
HDAC3-203ENST00000467533 APOBEC1P41238 236 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms