RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 SPAG4Q9NPE6 437 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 TIGARQ9NQ88 270 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 KLHL13Q9P2N7 655 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 CHRNA9Q9UGM1 479 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 FOXD3Q9UJU5 478 aaPredicted RBP8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 ZNF232Q9UNY5 417 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 CORO2BQ9UQ03 480 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 ANGPT4Q9Y264 503 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 AP3M1Q9Y2T2 418 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 TMED7Q9Y3B3 224 aa8.7□□□□□ -1.02
RTFDC1-205ENST00000466260 CDHR4A6H8M9 788 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 A8MXE2 369 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 SULT2B1O00204 365 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 SYT5O00445 386 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 MSTNO14793 375 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 SS18L1O75177 396 aaPredicted RBP8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 CRHP06850 196 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 THBS1P07996 1170 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 FCGR1AP12314 374 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 BMP2P12643 396 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 SLC6A2P23975 617 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 AGTR1P30556 359 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 APOBEC1P41238 236 aaKnown RBP8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 MAGEA8P43361 318 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 POLR2HP52434 150 aaKnown RBP8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 OR2B6P58173 313 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 COPZ1P61923 177 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 TRIP10Q15642 601 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 FBXL19-AS1Q494R0 122 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 RNF220Q5VTB9 566 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 ANKRD34AQ69YU3 496 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 ALKBH2Q6NS38 261 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 REEP3Q6NUK4 255 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 ZNF474Q6S9Z5 364 aaPredicted RBP8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 FKBP9P1Q75LS8 142 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 VASH1Q7L8A9 365 aaPredicted RBP8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 ZNF550Q7Z398 422 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 NUFIP2Q7Z417 695 aaKnown RBP8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 KIF18BQ86Y91 864 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 TUSC5Q8IXB3 177 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 SMYD1Q8NB12 490 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 HIPK4Q8NE63 616 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 OR10A6Q8NH74 314 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 RNF128Q8TEB7 428 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 C14orf79Q96F83 325 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 DUS3LQ96G46 650 aaKnown RBP8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 GMPPAQ96IJ6 420 aaPredicted RBP8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 ZNF300Q96RE9 604 aaPredicted RBP8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 SPATA9Q9BWV2 254 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 ARMC7Q9H6L4 198 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 JKAMPQ9P055 326 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 OSGIN1Q9UJX0 560 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 SLC13A4Q9UKG4 626 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 ITGB1BP2Q9UKP3 347 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 IFT52Q9Y366 437 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 CHST2Q9Y4C5 530 aa8.69□□□□□ -1.02
RTFDC1-205ENST00000466260 SMIM31A0A1B0GVY4 71 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 ZC3H12DA2A288 527 aaKnown RBP8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 SMAD9O15198 467 aaKnown RBP8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 PRKD3O94806 890 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 GPX2P18283 190 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 CXCR1P25024 350 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 ACAA2P42765 397 aaKnown RBP8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 RGS8P57771 180 aaPredicted RBP8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 RAC3P60763 192 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 RASGEF1BQ0VAM2 473 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 CCNIQ14094 377 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 TRIM25Q14258 630 aaKnown RBP8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 TSC22D1Q15714 1073 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 RABL3Q5HYI8 236 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 OGFRL1Q5TC84 451 aaPredicted RBP8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 GTF2IRD2BQ6EKJ0 949 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 TMPPEQ6ZT21 453 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 GTF2IRD2Q86UP8 949 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 COMTD1Q86VU5 262 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 ADGRG3Q86Y34 549 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 KRT73Q86Y46 540 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 PTOV1Q86YD1 416 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 ZNF440Q8IYI8 595 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 DPP10Q8N608 796 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 PACRGLQ8N7B6 248 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 ACBD4Q8NC06 268 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 OR6K3Q8NGY3 331 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 SLC25A43Q8WUT9 341 aaPredicted RBP8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 NRG4Q8WWG1 115 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 NRGNQ92686 78 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 CCDC124Q96CT7 223 aaKnown RBP8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 DDIT4LQ96D03 193 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 RCN3Q96D15 328 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 ZHX1-C8orf76Q96EF9 292 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 LURAP1Q96LR2 239 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 CDRT15Q96T59 188 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 TSC22D3Q99576 134 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 SPATA5L1Q9BVQ7 753 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 TMEM38AQ9H6F2 299 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 BCL2L10Q9HD36 194 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 VCX3AQ9NNX9 186 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 KLHL28Q9NXS3 571 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 RPS6KB2Q9UBS0 482 aa8.68□□□□□ -1.02
RTFDC1-205ENST00000466260 KCNN3Q9UGI6 736 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms