RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 CEACAM7Q14002 265 aa19.23■□□□□ 0.67
LIME1-203ENST00000465591 LILRB1Q8NHL6 650 aaPredicted RBP19.23■□□□□ 0.67
LIME1-203ENST00000465591 CCL19Q99731 98 aa19.23■□□□□ 0.67
LIME1-203ENST00000465591 CPPED1Q9BRF8 314 aaPredicted RBP19.23■□□□□ 0.67
LIME1-203ENST00000465591 POTEKPQ9BYX7 375 aa19.23■□□□□ 0.67
LIME1-203ENST00000465591 PLCE1Q9P212 2302 aa19.23■□□□□ 0.67
LIME1-203ENST00000465591 IDUAP35475 653 aa19.22■□□□□ 0.67
LIME1-203ENST00000465591 MAP2K6P52564 334 aa19.22■□□□□ 0.67
LIME1-203ENST00000465591 NKX6-1P78426 367 aaPredicted RBP19.22■□□□□ 0.67
LIME1-203ENST00000465591 SLC17A1Q14916 467 aa19.22■□□□□ 0.67
LIME1-203ENST00000465591 OR7A5Q15622 319 aa19.22■□□□□ 0.67
LIME1-203ENST00000465591 ADRM1Q16186 407 aa19.22■□□□□ 0.67
LIME1-203ENST00000465591 ZSWIM7Q19AV6 140 aa19.22■□□□□ 0.67
LIME1-203ENST00000465591 NCMAPQ5T1S8 102 aa19.22■□□□□ 0.67
LIME1-203ENST00000465591 FBXW9Q5XUX1 488 aa19.22■□□□□ 0.67
LIME1-203ENST00000465591 C20orf204Q6ZNR8 217 aa19.22■□□□□ 0.67
LIME1-203ENST00000465591 RETREG3Q86VR2 466 aa19.22■□□□□ 0.67
LIME1-203ENST00000465591 ZNF433Q8N7K0 673 aaPredicted RBP19.22■□□□□ 0.67
LIME1-203ENST00000465591 TMEM99Q8N816 258 aa19.22■□□□□ 0.67
LIME1-203ENST00000465591 HSD17B8Q92506 261 aa19.22■□□□□ 0.67
LIME1-203ENST00000465591 APH1AQ96BI3 265 aa19.22■□□□□ 0.67
LIME1-203ENST00000465591 PIP5K1AQ99755 562 aa19.22■□□□□ 0.67
LIME1-203ENST00000465591 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.22■□□□□ 0.67
LIME1-203ENST00000465591 FLVCR1Q9Y5Y0 555 aa19.22■□□□□ 0.67
LIME1-203ENST00000465591 TMEM229AB2RXF0 380 aa19.21■□□□□ 0.67
LIME1-203ENST00000465591 C5orf58C9J3I9 102 aa19.21■□□□□ 0.67
LIME1-203ENST00000465591 GPR171O14626 319 aa19.21■□□□□ 0.67
LIME1-203ENST00000465591 TPST1O60507 370 aa19.21■□□□□ 0.67
LIME1-203ENST00000465591 EIF1BO60739 113 aaKnown RBP19.21■□□□□ 0.67
LIME1-203ENST00000465591 NPIPB7O75200 414 aa19.21■□□□□ 0.67
LIME1-203ENST00000465591 AKR7A3O95154 331 aa19.21■□□□□ 0.67
LIME1-203ENST00000465591 CNOT4O95628 575 aaKnown RBP19.21■□□□□ 0.67
LIME1-203ENST00000465591 ETS2P15036 469 aa19.21■□□□□ 0.67
LIME1-203ENST00000465591 GPX2P18283 190 aa19.21■□□□□ 0.67
LIME1-203ENST00000465591 COPZ1P61923 177 aa19.21■□□□□ 0.67
LIME1-203ENST00000465591 IRX1P78414 480 aaPredicted RBP19.21■□□□□ 0.67
LIME1-203ENST00000465591 CDK6Q00534 326 aa19.21■□□□□ 0.67
LIME1-203ENST00000465591 CAPRIN1Q14444 709 aaKnown RBP19.21■□□□□ 0.67
LIME1-203ENST00000465591 STK11Q15831 433 aa19.21■□□□□ 0.67
LIME1-203ENST00000465591 GLIPR1L2Q4G1C9 344 aa19.21■□□□□ 0.67
LIME1-203ENST00000465591 PAQR6Q6TCH4 344 aa19.21■□□□□ 0.67
LIME1-203ENST00000465591 NEUROG1Q92886 237 aa19.21■□□□□ 0.67
LIME1-203ENST00000465591 PIGTQ969N2 578 aa19.21■□□□□ 0.67
LIME1-203ENST00000465591 NAA11Q9BSU3 229 aaPredicted RBP19.21■□□□□ 0.67
LIME1-203ENST00000465591 DPRXA6NFQ7 191 aa19.2■□□□□ 0.66
LIME1-203ENST00000465591 SMPD2O60906 423 aa19.2■□□□□ 0.66
LIME1-203ENST00000465591 MRPL33O75394 65 aaKnown RBP19.2■□□□□ 0.66
LIME1-203ENST00000465591 PPIBP23284 216 aaKnown RBP19.2■□□□□ 0.66
LIME1-203ENST00000465591 HTR2AP28223 471 aa19.2■□□□□ 0.66
LIME1-203ENST00000465591 P2RY4P51582 365 aa19.2■□□□□ 0.66
LIME1-203ENST00000465591 SELPLGQ14242 412 aa19.2■□□□□ 0.66
LIME1-203ENST00000465591 RUNDC3AQ59EK9 446 aa19.2■□□□□ 0.66
LIME1-203ENST00000465591 OTUD3Q5T2D3 398 aaPredicted RBP19.2■□□□□ 0.66
LIME1-203ENST00000465591 REEP3Q6NUK4 255 aa19.2■□□□□ 0.66
LIME1-203ENST00000465591 UBE2J2Q8N2K1 259 aa19.2■□□□□ 0.66
LIME1-203ENST00000465591 ZIC4Q8N9L1 334 aa19.2■□□□□ 0.66
LIME1-203ENST00000465591 OR52E4Q8NGH9 312 aa19.2■□□□□ 0.66
LIME1-203ENST00000465591 AKAP1Q92667 903 aaKnown RBP eCLIP19.2■□□□□ 0.66
LIME1-203ENST00000465591 PRR14Q9BWN1 585 aa19.2■□□□□ 0.66
LIME1-203ENST00000465591 CACYBPQ9HB71 228 aaKnown RBP19.2■□□□□ 0.66
LIME1-203ENST00000465591 NPAP1Q9NZP6 1156 aa19.2■□□□□ 0.66
LIME1-203ENST00000465591 LEF1Q9UJU2 399 aaPredicted RBP19.2■□□□□ 0.66
LIME1-203ENST00000465591 NF1P21359 2839 aa19.19■□□□□ 0.66
LIME1-203ENST00000465591 A0A0G2JND7 137 aa19.19■□□□□ 0.66
LIME1-203ENST00000465591 A8MVM7 634 aa19.19■□□□□ 0.66
LIME1-203ENST00000465591 HS3ST1O14792 307 aa19.19■□□□□ 0.66
LIME1-203ENST00000465591 RAD51DO75771 328 aa19.19■□□□□ 0.66
LIME1-203ENST00000465591 GPIP06744 558 aa19.19■□□□□ 0.66
LIME1-203ENST00000465591 PRKAR1BP31321 381 aa19.19■□□□□ 0.66
LIME1-203ENST00000465591 BSPH1Q075Z2 132 aa19.19■□□□□ 0.66
LIME1-203ENST00000465591 FAPQ12884 760 aa19.19■□□□□ 0.66
LIME1-203ENST00000465591 SCARB2Q14108 478 aa19.19■□□□□ 0.66
LIME1-203ENST00000465591 C1orf140Q5VVS0 124 aa19.19■□□□□ 0.66
LIME1-203ENST00000465591 DHRS4L2Q6PKH6 230 aa19.19■□□□□ 0.66
LIME1-203ENST00000465591 CASP12Q6UXS9 341 aa19.19■□□□□ 0.66
LIME1-203ENST00000465591 SLC35B4Q969S0 331 aa19.19■□□□□ 0.66
LIME1-203ENST00000465591 WFDC6Q9BQY6 131 aa19.19■□□□□ 0.66
LIME1-203ENST00000465591 GSX1Q9H4S2 264 aaPredicted RBP19.19■□□□□ 0.66
LIME1-203ENST00000465591 RABEP2Q9H5N1 569 aa19.19■□□□□ 0.66
LIME1-203ENST00000465591 TMEM38AQ9H6F2 299 aa19.19■□□□□ 0.66
LIME1-203ENST00000465591 ARMC7Q9H6L4 198 aa19.19■□□□□ 0.66
LIME1-203ENST00000465591 MALT1Q9UDY8 824 aa19.19■□□□□ 0.66
LIME1-203ENST00000465591 PRDM4Q9UKN5 801 aa19.19■□□□□ 0.66
LIME1-203ENST00000465591 RNF115Q9Y4L5 304 aa19.19■□□□□ 0.66
LIME1-203ENST00000465591 HEATR1Q9H583 2144 aaKnown RBP19.18■□□□□ 0.66
LIME1-203ENST00000465591 ALPK2Q86TB3 2170 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 OR5H1A6NKK0 313 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 AQP7P3A6NL99 342 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 PDLIM1O00151 329 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 CLOCKO15516 846 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 ITGA5P08648 1049 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 GGT1P19440 569 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 AQP1P29972 269 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 EGR4Q05215 589 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 PPA1Q15181 289 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 Q5PR19 223 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 DHDDSQ86SQ9 333 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 PTOV1Q86YD1 416 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 LRRC75A-AS1Q8N1F1 130 aa19.18■□□□□ 0.66
LIME1-203ENST00000465591 DPP10Q8N608 796 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms