RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 AGTR1P30556 359 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 IDUAP35475 653 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 CPOXP36551 454 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 YAP1P46937 504 aaKnown RBP10.39□□□□□ -0.75
CUX1-207ENST00000465461 ASCL1P50553 236 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 CTBP2P56545 445 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 SELENOWP63302 87 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 CSNK2A1P68400 391 aaPredicted RBP10.39□□□□□ -0.75
CUX1-207ENST00000465461 RASGEF1BQ0VAM2 473 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 EXOC3L2Q2M3D2 409 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 C1orf140Q5VVS0 124 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 GLYATQ6IB77 296 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 ULK3Q6PHR2 472 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 ZNF474Q6S9Z5 364 aaPredicted RBP10.39□□□□□ -0.75
CUX1-207ENST00000465461 WDR88Q6ZMY6 472 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 MEX3BQ6ZN04 569 aaKnown RBP10.39□□□□□ -0.75
CUX1-207ENST00000465461 DEF8Q6ZN54 512 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 FAM214BQ7L5A3 538 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 TMEM99Q8N816 258 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 FAM162AQ96A26 154 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 SLC25A36Q96CQ1 311 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 GMPPAQ96IJ6 420 aaPredicted RBP10.39□□□□□ -0.75
CUX1-207ENST00000465461 PSD2Q9BQI7 771 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 RBM24Q9BX46 236 aaKnown RBP10.39□□□□□ -0.75
CUX1-207ENST00000465461 CHST11Q9NPF2 352 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 ADPRHL2Q9NX46 363 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 SEC14L4Q9UDX3 406 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 PROCRQ9UNN8 238 aa10.39□□□□□ -0.75
CUX1-207ENST00000465461 LIPT2A6NK58 231 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 A8MXE2 369 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 LRRN3E7EW58 273 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 CYTIPO60759 359 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 NPIPB7O75200 414 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 LYPD3O95274 346 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 IFNA14P01570 189 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 CRHP06850 196 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 PRF1P14222 555 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 COX6B1P14854 86 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 CLK1P49759 484 aaKnown RBP10.38□□□□□ -0.75
CUX1-207ENST00000465461 SLC35A1P78382 337 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 LTBQ06643 244 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 FAM27E3Q08E93 113 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 GTF2IRD2BQ6EKJ0 949 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 C6orf89Q6UWU4 347 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 C16orf89Q6UX73 402 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 TRPM8Q7Z2W7 1104 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 GTF2IRD2Q86UP8 949 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 ADAMTS16Q8TE57 1224 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 DNAJA4Q8WW22 397 aaPredicted RBP10.38□□□□□ -0.75
CUX1-207ENST00000465461 RASSF5Q8WWW0 418 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 RNASE6Q93091 150 aaKnown RBP10.38□□□□□ -0.75
CUX1-207ENST00000465461 SLC38A4Q969I6 547 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 TAAR8Q969N4 342 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 SLC47A1Q96FL8 570 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 PTDSS2Q9BVG9 487 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 POTEKPQ9BYX7 375 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 ENKD1Q9H0I2 346 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 PCDHAC1Q9H158 963 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 PIGMQ9H3S5 423 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 GALNT8Q9NY28 637 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 SELENONQ9NZV5 590 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 CD300AQ9UGN4 299 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 BAG5Q9UL15 447 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 SLC7A7Q9UM01 511 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 TRAPPC4Q9Y296 219 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 EMC9Q9Y3B6 208 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 SNX13Q9Y5W8 968 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 V9GYQ6 96 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 MPDZO75970 2070 aa10.38□□□□□ -0.75
CUX1-207ENST00000465461 HECTD1Q9ULT8 2610 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 A0A087WUJ7 227 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 J3KTA2 159 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 UBOX5O94941 541 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 AHSA1O95433 338 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 YES1P07947 543 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 PNMTP11086 282 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 CALB2P22676 271 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 FKBP2P26885 142 aaKnown RBP10.37□□□□□ -0.75
CUX1-207ENST00000465461 NTF4P34130 210 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 PTPN13Q12923 2485 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 PIN1Q13526 163 aaPredicted RBP10.37□□□□□ -0.75
CUX1-207ENST00000465461 SPTAN1Q13813 2472 aaKnown RBP10.37□□□□□ -0.75
CUX1-207ENST00000465461 RNPS1Q15287 305 aaKnown RBP10.37□□□□□ -0.75
CUX1-207ENST00000465461 TMEM201Q5SNT2 666 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 OTUD3Q5T2D3 398 aaPredicted RBP10.37□□□□□ -0.75
CUX1-207ENST00000465461 ABLIM2Q6H8Q1 611 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 FKBP9P1Q75LS8 142 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 CBLL1Q75N03 491 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 GDF7Q7Z4P5 450 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 SLC43A2Q8N370 569 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 KDM8Q8N371 416 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 FAM86B1Q8N7N1 296 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 OR6K3Q8NGY3 331 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 LINC01560Q8TB33 94 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 STK35Q8TDR2 534 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 MARVELD3Q96A59 401 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 ZHX1-C8orf76Q96EF9 292 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 HSH2DQ96JZ2 352 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 TAPBPLQ9BX59 468 aa10.37□□□□□ -0.75
CUX1-207ENST00000465461 AMBRA1Q9C0C7 1298 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms